Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VRK2Q86Y07 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK2Q86Y07 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.88■□□□□ 0.45
VRK2Q86Y07 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK2Q86Y07 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK2Q86Y07 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK2Q86Y07 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 KRT18P16-201ENST00000510337 1294 ntBASIC17.88■□□□□ 0.45
VRK2Q86Y07 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 AC141586.3-201ENST00000562166 1838 ntBASIC17.88■□□□□ 0.45
VRK2Q86Y07 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VRK2Q86Y07 AC093503.3-201ENST00000624917 2352 ntBASIC17.88■□□□□ 0.45
VRK2Q86Y07 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK2Q86Y07 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK2Q86Y07 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VRK2Q86Y07 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.87■□□□□ 0.45
VRK2Q86Y07 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.87■□□□□ 0.45
VRK2Q86Y07 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.87■□□□□ 0.45
VRK2Q86Y07 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.87■□□□□ 0.45
VRK2Q86Y07 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.87■□□□□ 0.45
VRK2Q86Y07 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.87■□□□□ 0.45
VRK2Q86Y07 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.87■□□□□ 0.45
VRK2Q86Y07 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.87■□□□□ 0.45
VRK2Q86Y07 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.87■□□□□ 0.45
VRK2Q86Y07 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.87■□□□□ 0.45
VRK2Q86Y07 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
VRK2Q86Y07 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
VRK2Q86Y07 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
VRK2Q86Y07 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK2Q86Y07 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.86■□□□□ 0.45
VRK2Q86Y07 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
VRK2Q86Y07 UNC93B5-201ENST00000530315 699 ntBASIC17.86■□□□□ 0.45
VRK2Q86Y07 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.86■□□□□ 0.45
VRK2Q86Y07 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK2Q86Y07 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK2Q86Y07 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK2Q86Y07 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
VRK2Q86Y07 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK2Q86Y07 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
VRK2Q86Y07 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VRK2Q86Y07 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK2Q86Y07 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.86■□□□□ 0.45
VRK2Q86Y07 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK2Q86Y07 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK2Q86Y07 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK2Q86Y07 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK2Q86Y07 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VRK2Q86Y07 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.85■□□□□ 0.45
VRK2Q86Y07 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK2Q86Y07 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK2Q86Y07 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK2Q86Y07 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK2Q86Y07 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.85■□□□□ 0.45
VRK2Q86Y07 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VRK2Q86Y07 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
VRK2Q86Y07 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.85■□□□□ 0.45
VRK2Q86Y07 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VRK2Q86Y07 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK2Q86Y07 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms