Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
SYCNQ0VAF6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SYCNQ0VAF6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
SYCNQ0VAF6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SYCNQ0VAF6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SYCNQ0VAF6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SYCNQ0VAF6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SYCNQ0VAF6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SYCNQ0VAF6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SYCNQ0VAF6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SYCNQ0VAF6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SYCNQ0VAF6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 AC120498.8-201ENST00000614275 531 ntBASIC12.79□□□□□ -0.36
SYCNQ0VAF6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SYCNQ0VAF6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 AL355802.2-201ENST00000402069 882 ntBASIC12.78□□□□□ -0.36
SYCNQ0VAF6 YBX1P10-201ENST00000444752 975 ntBASIC12.78□□□□□ -0.36
SYCNQ0VAF6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 PNN-205ENST00000556530 601 ntTSL 2 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 AC142086.2-201ENST00000569753 217 ntBASIC12.78□□□□□ -0.36
SYCNQ0VAF6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 AC008687.6-201ENST00000596318 630 ntBASIC12.78□□□□□ -0.36
SYCNQ0VAF6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 Z82202.1-201ENST00000623446 1880 ntBASIC12.78□□□□□ -0.36
SYCNQ0VAF6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SYCNQ0VAF6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SYCNQ0VAF6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SYCNQ0VAF6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SYCNQ0VAF6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SYCNQ0VAF6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SYCNQ0VAF6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC12.77□□□□□ -0.36
SYCNQ0VAF6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SYCNQ0VAF6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SYCNQ0VAF6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.77□□□□□ -0.36
SYCNQ0VAF6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SYCNQ0VAF6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SYCNQ0VAF6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms