Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HMGCS1Q01581 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.63■□□□□ 0.57
HMGCS1Q01581 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.63■□□□□ 0.57
HMGCS1Q01581 YBX1P10-201ENST00000444752 975 ntBASIC18.63■□□□□ 0.57
HMGCS1Q01581 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.63■□□□□ 0.57
HMGCS1Q01581 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGCS1Q01581 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGCS1Q01581 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGCS1Q01581 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGCS1Q01581 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCS1Q01581 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCS1Q01581 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCS1Q01581 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCS1Q01581 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 AC008687.6-201ENST00000596318 630 ntBASIC18.62■□□□□ 0.57
HMGCS1Q01581 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCS1Q01581 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCS1Q01581 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCS1Q01581 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCS1Q01581 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HMGCS1Q01581 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCS1Q01581 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCS1Q01581 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HMGCS1Q01581 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCS1Q01581 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCS1Q01581 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HMGCS1Q01581 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCS1Q01581 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 AC104417.2-201ENST00000562989 1793 ntBASIC18.61■□□□□ 0.57
HMGCS1Q01581 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 KRT8P8-201ENST00000434750 1448 ntBASIC18.61■□□□□ 0.57
HMGCS1Q01581 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCS1Q01581 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCS1Q01581 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
HMGCS1Q01581 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGCS1Q01581 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.61■□□□□ 0.57
HMGCS1Q01581 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.61■□□□□ 0.57
HMGCS1Q01581 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGCS1Q01581 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCS1Q01581 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.61■□□□□ 0.57
HMGCS1Q01581 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS1Q01581 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS1Q01581 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS1Q01581 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS1Q01581 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS1Q01581 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS1Q01581 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.6■□□□□ 0.57
HMGCS1Q01581 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HMGCS1Q01581 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HMGCS1Q01581 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS1Q01581 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HMGCS1Q01581 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS1Q01581 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS1Q01581 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HMGCS1Q01581 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.6■□□□□ 0.57
HMGCS1Q01581 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS1Q01581 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.6■□□□□ 0.57
HMGCS1Q01581 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS1Q01581 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HMGCS1Q01581 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HMGCS1Q01581 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS1Q01581 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms