Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CDKN1AP38936 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDKN1AP38936 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKN1AP38936 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKN1AP38936 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.5■□□□□ 0.23
CDKN1AP38936 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKN1AP38936 KRT8P8-201ENST00000434750 1448 ntBASIC16.5■□□□□ 0.23
CDKN1AP38936 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CDKN1AP38936 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDKN1AP38936 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN1AP38936 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN1AP38936 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN1AP38936 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN1AP38936 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CDKN1AP38936 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKN1AP38936 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN1AP38936 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN1AP38936 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKN1AP38936 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CDKN1AP38936 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN1AP38936 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN1AP38936 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKN1AP38936 AK4P3-201ENST00000418260 669 ntBASIC16.49■□□□□ 0.23
CDKN1AP38936 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.49■□□□□ 0.23
CDKN1AP38936 AC091390.4-202ENST00000476426 537 ntBASIC16.49■□□□□ 0.23
CDKN1AP38936 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKN1AP38936 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN1AP38936 AC116562.4-202ENST00000641738 218 ntBASIC16.49■□□□□ 0.23
CDKN1AP38936 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN1AP38936 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN1AP38936 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKN1AP38936 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKN1AP38936 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDKN1AP38936 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CDKN1AP38936 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKN1AP38936 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKN1AP38936 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN1AP38936 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN1AP38936 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN1AP38936 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.48■□□□□ 0.23
CDKN1AP38936 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKN1AP38936 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN1AP38936 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN1AP38936 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN1AP38936 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN1AP38936 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN1AP38936 HMGA1P5-201ENST00000412453 271 ntBASIC16.48■□□□□ 0.23
CDKN1AP38936 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKN1AP38936 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.48■□□□□ 0.23
CDKN1AP38936 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CDKN1AP38936 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CDKN1AP38936 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN1AP38936 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN1AP38936 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CDKN1AP38936 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKN1AP38936 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CDKN1AP38936 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN1AP38936 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN1AP38936 LINC01465-201ENST00000408887 1940 ntBASIC16.47■□□□□ 0.23
CDKN1AP38936 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.47■□□□□ 0.23
CDKN1AP38936 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.47■□□□□ 0.23
CDKN1AP38936 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN1AP38936 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN1AP38936 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN1AP38936 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.47■□□□□ 0.23
CDKN1AP38936 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.47■□□□□ 0.23
CDKN1AP38936 CCR12P-201ENST00000446203 998 ntBASIC16.47■□□□□ 0.23
CDKN1AP38936 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.47■□□□□ 0.23
CDKN1AP38936 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDKN1AP38936 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.47■□□□□ 0.23
CDKN1AP38936 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.47■□□□□ 0.23
CDKN1AP38936 AC096733.2-201ENST00000609937 1394 ntBASIC16.47■□□□□ 0.23
CDKN1AP38936 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.47■□□□□ 0.23
CDKN1AP38936 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN1AP38936 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN1AP38936 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKN1AP38936 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKN1AP38936 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKN1AP38936 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDKN1AP38936 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDKN1AP38936 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.46■□□□□ 0.23
CDKN1AP38936 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDKN1AP38936 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms