Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSP1P33241 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.41■□□□□ 0.7
LSP1P33241 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSP1P33241 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.41■□□□□ 0.7
LSP1P33241 PGM5P4-201ENST00000421970 445 ntBASIC19.41■□□□□ 0.7
LSP1P33241 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.41■□□□□ 0.7
LSP1P33241 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSP1P33241 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSP1P33241 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSP1P33241 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSP1P33241 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSP1P33241 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.41■□□□□ 0.7
LSP1P33241 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.41■□□□□ 0.7
LSP1P33241 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.41■□□□□ 0.7
LSP1P33241 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.41■□□□□ 0.7
LSP1P33241 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LSP1P33241 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.4■□□□□ 0.7
LSP1P33241 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.4■□□□□ 0.7
LSP1P33241 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.4■□□□□ 0.7
LSP1P33241 AL031963.3-201ENST00000606441 850 ntBASIC19.4■□□□□ 0.7
LSP1P33241 AL358852.1-201ENST00000623174 1268 ntBASIC19.4■□□□□ 0.7
LSP1P33241 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.4■□□□□ 0.7
LSP1P33241 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LSP1P33241 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.4■□□□□ 0.7
LSP1P33241 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LSP1P33241 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSP1P33241 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
LSP1P33241 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LSP1P33241 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
LSP1P33241 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LSP1P33241 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
LSP1P33241 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LSP1P33241 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
LSP1P33241 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSP1P33241 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSP1P33241 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSP1P33241 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSP1P33241 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LSP1P33241 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.39■□□□□ 0.69
LSP1P33241 SLC7A5P2-201ENST00000553010 536 ntBASIC19.39■□□□□ 0.69
LSP1P33241 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LSP1P33241 MIR4767-201ENST00000582827 78 ntBASIC19.39■□□□□ 0.69
LSP1P33241 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.39■□□□□ 0.69
LSP1P33241 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSP1P33241 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSP1P33241 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSP1P33241 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.39■□□□□ 0.69
LSP1P33241 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSP1P33241 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.39■□□□□ 0.69
LSP1P33241 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.39■□□□□ 0.69
LSP1P33241 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSP1P33241 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.39■□□□□ 0.69
LSP1P33241 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSP1P33241 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSP1P33241 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LSP1P33241 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.38■□□□□ 0.69
LSP1P33241 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.38■□□□□ 0.69
LSP1P33241 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LSP1P33241 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LSP1P33241 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 AC010141.2-201ENST00000452426 721 ntBASIC19.38■□□□□ 0.69
LSP1P33241 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.38■□□□□ 0.69
LSP1P33241 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 AC087633.2-202ENST00000565166 1439 ntBASIC19.38■□□□□ 0.69
LSP1P33241 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.38■□□□□ 0.69
LSP1P33241 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.38■□□□□ 0.69
LSP1P33241 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LSP1P33241 PHGDH-210ENST00000641115 1638 ntBASIC19.38■□□□□ 0.69
LSP1P33241 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSP1P33241 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
LSP1P33241 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LSP1P33241 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms