Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6GP18545 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6GP18545 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6GP18545 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6GP18545 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6GP18545 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6GP18545 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC11.98□□□□□ -0.49
PDE6GP18545 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
PDE6GP18545 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
PDE6GP18545 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
PDE6GP18545 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC11.97□□□□□ -0.49
PDE6GP18545 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
PDE6GP18545 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 AC006455.2-201ENST00000429931 906 ntBASIC11.97□□□□□ -0.49
PDE6GP18545 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
PDE6GP18545 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC11.97□□□□□ -0.49
PDE6GP18545 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
PDE6GP18545 MIR3181-201ENST00000578512 73 ntBASIC11.97□□□□□ -0.49
PDE6GP18545 AC092171.4-201ENST00000609130 632 ntBASIC11.97□□□□□ -0.49
PDE6GP18545 PVT1_1.1-201ENST00000615125 194 ntBASIC11.97□□□□□ -0.49
PDE6GP18545 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
PDE6GP18545 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC11.97□□□□□ -0.49
PDE6GP18545 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
PDE6GP18545 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6GP18545 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC11.97□□□□□ -0.49
PDE6GP18545 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC11.96□□□□□ -0.49
PDE6GP18545 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
PDE6GP18545 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PDE6GP18545 AL162741.1-201ENST00000565563 1558 ntBASIC11.96□□□□□ -0.49
PDE6GP18545 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
PDE6GP18545 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PDE6GP18545 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC11.96□□□□□ -0.49
PDE6GP18545 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC11.96□□□□□ -0.49
PDE6GP18545 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC11.96□□□□□ -0.49
PDE6GP18545 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC11.96□□□□□ -0.49
PDE6GP18545 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
PDE6GP18545 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PDE6GP18545 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
PDE6GP18545 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC11.96□□□□□ -0.49
PDE6GP18545 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PDE6GP18545 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PDE6GP18545 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PDE6GP18545 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PDE6GP18545 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
PDE6GP18545 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PDE6GP18545 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
PDE6GP18545 AC141586.3-201ENST00000562166 1838 ntBASIC11.96□□□□□ -0.49
PDE6GP18545 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PDE6GP18545 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC11.96□□□□□ -0.49
PDE6GP18545 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC11.96□□□□□ -0.49
PDE6GP18545 U85056.1-201ENST00000616429 682 ntBASIC11.96□□□□□ -0.49
PDE6GP18545 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC11.96□□□□□ -0.49
PDE6GP18545 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
PDE6GP18545 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
PDE6GP18545 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
PDE6GP18545 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
PDE6GP18545 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
PDE6GP18545 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC11.96□□□□□ -0.5
PDE6GP18545 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC11.95□□□□□ -0.5
PDE6GP18545 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC11.95□□□□□ -0.5
PDE6GP18545 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
PDE6GP18545 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms