Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RETP07949 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RETP07949 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RETP07949 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.52■□□□□ 0.72
RETP07949 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RETP07949 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RETP07949 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RETP07949 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RETP07949 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.52■□□□□ 0.72
RETP07949 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.52■□□□□ 0.72
RETP07949 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RETP07949 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.52■□□□□ 0.72
RETP07949 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RETP07949 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RETP07949 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.52■□□□□ 0.72
RETP07949 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.52■□□□□ 0.72
RETP07949 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.52■□□□□ 0.72
RETP07949 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.52■□□□□ 0.72
RETP07949 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
RETP07949 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.52■□□□□ 0.72
RETP07949 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RETP07949 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RETP07949 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
RETP07949 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.52■□□□□ 0.71
RETP07949 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RETP07949 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.52■□□□□ 0.71
RETP07949 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RETP07949 AC007952.6-201ENST00000573168 2673 ntBASIC19.51■□□□□ 0.71
RETP07949 AC003957.1-201ENST00000625108 2673 ntBASIC19.51■□□□□ 0.71
RETP07949 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RETP07949 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RETP07949 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.51■□□□□ 0.71
RETP07949 AL671277.2-201ENST00000458060 996 ntBASIC19.51■□□□□ 0.71
RETP07949 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RETP07949 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.51■□□□□ 0.71
RETP07949 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RETP07949 AL512604.3-201ENST00000569583 964 ntBASIC19.51■□□□□ 0.71
RETP07949 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.51■□□□□ 0.71
RETP07949 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RETP07949 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RETP07949 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RETP07949 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.51■□□□□ 0.71
RETP07949 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RETP07949 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.51■□□□□ 0.71
RETP07949 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.51■□□□□ 0.71
RETP07949 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.51■□□□□ 0.71
RETP07949 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RETP07949 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RETP07949 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RETP07949 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RETP07949 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RETP07949 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RETP07949 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RETP07949 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RETP07949 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.5■□□□□ 0.71
RETP07949 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RETP07949 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RETP07949 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RETP07949 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RETP07949 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RETP07949 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RETP07949 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.5■□□□□ 0.71
RETP07949 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RETP07949 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RETP07949 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.5■□□□□ 0.71
RETP07949 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.5■□□□□ 0.71
RETP07949 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.5■□□□□ 0.71
RETP07949 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.5■□□□□ 0.71
RETP07949 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
RETP07949 AC069148.1-201ENST00000608741 768 ntBASIC19.5■□□□□ 0.71
RETP07949 AC116407.4-201ENST00000623319 1061 ntBASIC19.5■□□□□ 0.71
RETP07949 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RETP07949 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RETP07949 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RETP07949 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
RETP07949 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RETP07949 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RETP07949 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RETP07949 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RETP07949 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RETP07949 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.49■□□□□ 0.71
RETP07949 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RETP07949 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.49■□□□□ 0.71
RETP07949 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RETP07949 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.49■□□□□ 0.71
RETP07949 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
RETP07949 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RETP07949 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.49■□□□□ 0.71
RETP07949 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RETP07949 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.49■□□□□ 0.71
RETP07949 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.49■□□□□ 0.71
RETP07949 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RETP07949 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RETP07949 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.49■□□□□ 0.71
RETP07949 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
RETP07949 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RETP07949 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.49■□□□□ 0.71
RETP07949 AC007663.1-201ENST00000438948 1240 ntBASIC19.49■□□□□ 0.71
RETP07949 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RETP07949 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms