Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA1P02708 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA1P02708 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA1P02708 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA1P02708 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CHRNA1P02708 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.07■□□□□ 0.96
CHRNA1P02708 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.07■□□□□ 0.96
CHRNA1P02708 FAM86EP-206ENST00000510506 987 ntBASIC21.07■□□□□ 0.96
CHRNA1P02708 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.07■□□□□ 0.96
CHRNA1P02708 PRSS44-201ENST00000515154 1146 ntBASIC21.07■□□□□ 0.96
CHRNA1P02708 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.07■□□□□ 0.96
CHRNA1P02708 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.07■□□□□ 0.96
CHRNA1P02708 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.07■□□□□ 0.96
CHRNA1P02708 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.07■□□□□ 0.96
CHRNA1P02708 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.07■□□□□ 0.96
CHRNA1P02708 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHRNA1P02708 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.07■□□□□ 0.96
CHRNA1P02708 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA1P02708 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA1P02708 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA1P02708 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
CHRNA1P02708 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CHRNA1P02708 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.06■□□□□ 0.96
CHRNA1P02708 HOMER2P1-201ENST00000455653 964 ntBASIC21.06■□□□□ 0.96
CHRNA1P02708 AL359075.1-203ENST00000462729 1002 ntBASIC21.06■□□□□ 0.96
CHRNA1P02708 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.06■□□□□ 0.96
CHRNA1P02708 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.06■□□□□ 0.96
CHRNA1P02708 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.06■□□□□ 0.96
CHRNA1P02708 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CHRNA1P02708 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.06■□□□□ 0.96
CHRNA1P02708 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.06■□□□□ 0.96
CHRNA1P02708 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.06■□□□□ 0.96
CHRNA1P02708 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.06■□□□□ 0.96
CHRNA1P02708 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHRNA1P02708 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHRNA1P02708 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CHRNA1P02708 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.06■□□□□ 0.96
CHRNA1P02708 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CHRNA1P02708 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA1P02708 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA1P02708 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.05■□□□□ 0.96
CHRNA1P02708 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA1P02708 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA1P02708 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.05■□□□□ 0.96
CHRNA1P02708 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA1P02708 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.05■□□□□ 0.96
CHRNA1P02708 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.05■□□□□ 0.96
CHRNA1P02708 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.05■□□□□ 0.96
CHRNA1P02708 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA1P02708 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.05■□□□□ 0.96
CHRNA1P02708 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA1P02708 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.05■□□□□ 0.96
CHRNA1P02708 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.05■□□□□ 0.96
CHRNA1P02708 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHRNA1P02708 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CHRNA1P02708 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.04■□□□□ 0.96
CHRNA1P02708 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CHRNA1P02708 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.04■□□□□ 0.96
CHRNA1P02708 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.04■□□□□ 0.96
CHRNA1P02708 KRT18P38-201ENST00000449496 1282 ntBASIC21.04■□□□□ 0.96
CHRNA1P02708 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.04■□□□□ 0.96
CHRNA1P02708 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.04■□□□□ 0.96
CHRNA1P02708 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.04■□□□□ 0.96
CHRNA1P02708 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.04■□□□□ 0.96
CHRNA1P02708 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.04■□□□□ 0.96
CHRNA1P02708 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.04■□□□□ 0.96
CHRNA1P02708 AL121956.5-201ENST00000625261 221 ntBASIC21.04■□□□□ 0.96
CHRNA1P02708 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.04■□□□□ 0.96
CHRNA1P02708 AP000550.4-202ENST00000639755 178 ntBASIC21.04■□□□□ 0.96
CHRNA1P02708 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.04■□□□□ 0.96
CHRNA1P02708 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms