Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCAF4O95104 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.82■□□□□ 0.12
SCAF4O95104 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.82■□□□□ 0.12
SCAF4O95104 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.82■□□□□ 0.12
SCAF4O95104 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SCAF4O95104 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SCAF4O95104 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.82■□□□□ 0.12
SCAF4O95104 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.82■□□□□ 0.12
SCAF4O95104 KRT18P11-201ENST00000435214 1283 ntBASIC15.82■□□□□ 0.12
SCAF4O95104 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.82■□□□□ 0.12
SCAF4O95104 AC092437.1-201ENST00000624794 1048 ntBASIC15.82■□□□□ 0.12
SCAF4O95104 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SCAF4O95104 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SCAF4O95104 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.82■□□□□ 0.12
SCAF4O95104 AC087633.2-202ENST00000565166 1439 ntBASIC15.82■□□□□ 0.12
SCAF4O95104 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.82■□□□□ 0.12
SCAF4O95104 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.82■□□□□ 0.12
SCAF4O95104 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.82■□□□□ 0.12
SCAF4O95104 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SCAF4O95104 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCAF4O95104 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.81■□□□□ 0.12
SCAF4O95104 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 NFIC-211ENST00000641145 8399 ntBASIC15.81■□□□□ 0.12
SCAF4O95104 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.81■□□□□ 0.12
SCAF4O95104 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SCAF4O95104 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SCAF4O95104 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.81■□□□□ 0.12
SCAF4O95104 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.81■□□□□ 0.12
SCAF4O95104 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.81■□□□□ 0.12
SCAF4O95104 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SCAF4O95104 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SCAF4O95104 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.81■□□□□ 0.12
SCAF4O95104 BID-214ENST00000617586 542 ntTSL 5 BASIC15.81■□□□□ 0.12
SCAF4O95104 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.81■□□□□ 0.12
SCAF4O95104 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.81■□□□□ 0.12
SCAF4O95104 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCAF4O95104 AL032819.2-201ENST00000624543 2162 ntBASIC15.8■□□□□ 0.12
SCAF4O95104 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.8■□□□□ 0.12
SCAF4O95104 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.8■□□□□ 0.12
SCAF4O95104 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.8■□□□□ 0.12
SCAF4O95104 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 RBM17P2-201ENST00000616397 1405 ntBASIC15.8■□□□□ 0.12
SCAF4O95104 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.8■□□□□ 0.12
SCAF4O95104 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.8■□□□□ 0.12
SCAF4O95104 AC006015.1-201ENST00000429970 570 ntBASIC15.8■□□□□ 0.12
SCAF4O95104 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.8■□□□□ 0.12
SCAF4O95104 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SCAF4O95104 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.8■□□□□ 0.12
SCAF4O95104 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.8■□□□□ 0.12
SCAF4O95104 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.8■□□□□ 0.12
SCAF4O95104 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.8■□□□□ 0.12
SCAF4O95104 MYCNOS-205ENST00000641950 531 ntBASIC15.8■□□□□ 0.12
SCAF4O95104 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SCAF4O95104 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SCAF4O95104 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.8■□□□□ 0.12
SCAF4O95104 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms