Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC188H7C350 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC188H7C350 IRX1P1-201ENST00000438849 1838 ntBASIC20.12■□□□□ 0.81
CCDC188H7C350 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC188H7C350 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC188H7C350 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC188H7C350 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC188H7C350 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC188H7C350 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC188H7C350 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC188H7C350 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
CCDC188H7C350 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCDC188H7C350 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC188H7C350 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC188H7C350 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC188H7C350 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC188H7C350 AL512353.2-201ENST00000448759 1962 ntBASIC20.12■□□□□ 0.81
CCDC188H7C350 KRT17P1-201ENST00000399211 1546 ntBASIC20.12■□□□□ 0.81
CCDC188H7C350 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC188H7C350 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC188H7C350 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC188H7C350 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC188H7C350 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC188H7C350 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC188H7C350 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC188H7C350 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CCDC188H7C350 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.11■□□□□ 0.81
CCDC188H7C350 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC188H7C350 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.11■□□□□ 0.81
CCDC188H7C350 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC188H7C350 BID-214ENST00000617586 542 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC188H7C350 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CCDC188H7C350 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CCDC188H7C350 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCDC188H7C350 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
CCDC188H7C350 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CCDC188H7C350 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CCDC188H7C350 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC188H7C350 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC188H7C350 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC188H7C350 AC104417.2-201ENST00000562989 1793 ntBASIC20.11■□□□□ 0.81
CCDC188H7C350 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC188H7C350 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC188H7C350 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCDC188H7C350 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCDC188H7C350 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC188H7C350 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC188H7C350 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC188H7C350 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC188H7C350 AC020763.4-201ENST00000623414 4170 ntBASIC20.1■□□□□ 0.81
CCDC188H7C350 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC188H7C350 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC188H7C350 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC188H7C350 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC188H7C350 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC188H7C350 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC188H7C350 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC188H7C350 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC188H7C350 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.1■□□□□ 0.81
CCDC188H7C350 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.1■□□□□ 0.81
CCDC188H7C350 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC188H7C350 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC188H7C350 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC188H7C350 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC188H7C350 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC188H7C350 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC188H7C350 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CCDC188H7C350 BICD1-207ENST00000551848 1962 ntBASIC20.1■□□□□ 0.81
CCDC188H7C350 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC188H7C350 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC188H7C350 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC188H7C350 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC188H7C350 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC188H7C350 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC188H7C350 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.09■□□□□ 0.81
CCDC188H7C350 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC188H7C350 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC188H7C350 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.09■□□□□ 0.81
CCDC188H7C350 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC188H7C350 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC188H7C350 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC188H7C350 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC188H7C350 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC188H7C350 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms