Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
USP27XA6NNY8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP27XA6NNY8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.89■□□□□ 0.94
USP27XA6NNY8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP27XA6NNY8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.89■□□□□ 0.94
USP27XA6NNY8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP27XA6NNY8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP27XA6NNY8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP27XA6NNY8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.89■□□□□ 0.94
USP27XA6NNY8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP27XA6NNY8 MIR935-201ENST00000401179 91 ntBASIC20.89■□□□□ 0.93
USP27XA6NNY8 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.89■□□□□ 0.93
USP27XA6NNY8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.89■□□□□ 0.93
USP27XA6NNY8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP27XA6NNY8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.89■□□□□ 0.93
USP27XA6NNY8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP27XA6NNY8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP27XA6NNY8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP27XA6NNY8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
USP27XA6NNY8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP27XA6NNY8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP27XA6NNY8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
USP27XA6NNY8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.88■□□□□ 0.93
USP27XA6NNY8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
USP27XA6NNY8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.88■□□□□ 0.93
USP27XA6NNY8 ZNF815P-204ENST00000434898 1737 ntBASIC20.88■□□□□ 0.93
USP27XA6NNY8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 AC027612.3-201ENST00000413684 1047 ntBASIC20.88■□□□□ 0.93
USP27XA6NNY8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.88■□□□□ 0.93
USP27XA6NNY8 AC110285.6-201ENST00000617652 491 ntBASIC20.88■□□□□ 0.93
USP27XA6NNY8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.88■□□□□ 0.93
USP27XA6NNY8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.88■□□□□ 0.93
USP27XA6NNY8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
USP27XA6NNY8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.88■□□□□ 0.93
USP27XA6NNY8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP27XA6NNY8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP27XA6NNY8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP27XA6NNY8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
USP27XA6NNY8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.87■□□□□ 0.93
USP27XA6NNY8 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.87■□□□□ 0.93
USP27XA6NNY8 LINC02228-203ENST00000641970 1355 ntBASIC20.87■□□□□ 0.93
USP27XA6NNY8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP27XA6NNY8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP27XA6NNY8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP27XA6NNY8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.87■□□□□ 0.93
USP27XA6NNY8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.87■□□□□ 0.93
USP27XA6NNY8 UBE2DNL-204ENST00000602536 740 ntBASIC20.87■□□□□ 0.93
USP27XA6NNY8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP27XA6NNY8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP27XA6NNY8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP27XA6NNY8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP27XA6NNY8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP27XA6NNY8 AC106820.2-201ENST00000563775 3264 ntBASIC20.87■□□□□ 0.93
USP27XA6NNY8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
USP27XA6NNY8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.87■□□□□ 0.93
USP27XA6NNY8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
USP27XA6NNY8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.87■□□□□ 0.93
USP27XA6NNY8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.87■□□□□ 0.93
USP27XA6NNY8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
USP27XA6NNY8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP27XA6NNY8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP27XA6NNY8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
USP27XA6NNY8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP27XA6NNY8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP27XA6NNY8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
USP27XA6NNY8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP27XA6NNY8 SUDS3P1-201ENST00000505831 966 ntBASIC20.86■□□□□ 0.93
USP27XA6NNY8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.86■□□□□ 0.93
USP27XA6NNY8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.86■□□□□ 0.93
USP27XA6NNY8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
USP27XA6NNY8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP27XA6NNY8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.86■□□□□ 0.93
USP27XA6NNY8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP27XA6NNY8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP27XA6NNY8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
USP27XA6NNY8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP27XA6NNY8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP27XA6NNY8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP27XA6NNY8 SDHAP1-207ENST00000440850 2000 ntBASIC20.85■□□□□ 0.93
USP27XA6NNY8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
USP27XA6NNY8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP27XA6NNY8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.85■□□□□ 0.93
USP27XA6NNY8 ABALON-201ENST00000629058 1903 ntBASIC20.85■□□□□ 0.93
USP27XA6NNY8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.85■□□□□ 0.93
USP27XA6NNY8 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.85■□□□□ 0.93
USP27XA6NNY8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms