Protein–RNA interactions for Protein: A6NKF1

SAC3D1, SAC3 domain-containing protein 1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAC3D1A6NKF1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SAC3D1A6NKF1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 KRT8P20-201ENST00000423953 1409 ntBASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 PHGDH-210ENST00000641115 1638 ntBASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAC3D1A6NKF1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SAC3D1A6NKF1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SAC3D1A6NKF1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SAC3D1A6NKF1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SAC3D1A6NKF1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 PBX2P1-201ENST00000493219 1291 ntBASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 KRT18P20-201ENST00000548986 1279 ntBASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 AF213884.3-201ENST00000563833 479 ntBASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 Z98044.1-201ENST00000632503 1764 ntBASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 CYP21A1P-202ENST00000354927 1481 ntBASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAC3D1A6NKF1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SAC3D1A6NKF1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms