Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 AC116562.4-201ENST00000641316 2276 ntBASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 RCN1P1-201ENST00000400413 996 ntBASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBAL3A6NHL2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 UNC93B2-201ENST00000285383 730 ntBASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 NUDT16P1-203ENST00000513809 620 ntBASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBAL3A6NHL2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 TMPOP1-202ENST00000424642 1267 ntBASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 AL031963.3-201ENST00000606441 850 ntBASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBAL3A6NHL2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms