Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 DRG1-207ENST00000629688 309 ntTSL 5 BASIC10.92□□□□□ -0.66
MSH5O43196 AL773545.4-201ENST00000637262 310 ntBASIC10.92□□□□□ -0.66
MSH5O43196 AL513478.4-201ENST00000641636 310 ntBASIC10.92□□□□□ -0.66
MSH5O43196 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MSH5O43196 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
MSH5O43196 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MSH5O43196 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
MSH5O43196 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC10.92□□□□□ -0.66
MSH5O43196 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC10.92□□□□□ -0.66
MSH5O43196 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC10.92□□□□□ -0.66
MSH5O43196 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC10.92□□□□□ -0.66
MSH5O43196 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC10.91□□□□□ -0.66
MSH5O43196 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MSH5O43196 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MSH5O43196 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
MSH5O43196 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
MSH5O43196 SMIM11P1-201ENST00000369586 178 ntBASIC10.91□□□□□ -0.66
MSH5O43196 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
MSH5O43196 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
MSH5O43196 BTF3P11-201ENST00000426582 477 ntBASIC10.91□□□□□ -0.66
MSH5O43196 AF274573.1-201ENST00000430535 494 ntBASIC10.91□□□□□ -0.66
MSH5O43196 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MSH5O43196 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC10.91□□□□□ -0.66
MSH5O43196 AC104581.2-201ENST00000572227 430 ntBASIC10.91□□□□□ -0.66
MSH5O43196 MIR4682-201ENST00000580643 80 ntBASIC10.91□□□□□ -0.66
MSH5O43196 STX8P1-201ENST00000603161 355 ntBASIC10.91□□□□□ -0.66
MSH5O43196 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC10.91□□□□□ -0.66
MSH5O43196 CUL1P1-201ENST00000509510 2425 ntBASIC10.91□□□□□ -0.66
MSH5O43196 DIS3L-201ENST00000319194 3763 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MSH5O43196 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MSH5O43196 SF3A3P1-201ENST00000446317 1477 ntBASIC10.91□□□□□ -0.66
MSH5O43196 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MSH5O43196 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MSH5O43196 GANC-206ENST00000566442 2512 ntTSL 2 BASIC10.91□□□□□ -0.66
MSH5O43196 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
MSH5O43196 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC10.9□□□□□ -0.66
MSH5O43196 NHSL2-208ENST00000639939 3402 ntTSL 5 BASIC10.9□□□□□ -0.66
MSH5O43196 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
MSH5O43196 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
MSH5O43196 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC10.9□□□□□ -0.66
MSH5O43196 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
MSH5O43196 LRRC37A11P-202ENST00000579258 3717 ntBASIC10.9□□□□□ -0.66
MSH5O43196 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
MSH5O43196 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
MSH5O43196 OR1L6-202ENST00000373684 1044 ntBASIC10.9□□□□□ -0.66
MSH5O43196 RNU1-28P-201ENST00000383861 164 ntBASIC10.9□□□□□ -0.66
MSH5O43196 RNU1-27P-201ENST00000383869 164 ntBASIC10.9□□□□□ -0.66
MSH5O43196 RNU1-1-201ENST00000383925 164 ntBASIC10.9□□□□□ -0.66
MSH5O43196 RNVU1-18-201ENST00000384010 164 ntBASIC10.9□□□□□ -0.66
MSH5O43196 RNU1-2-201ENST00000384278 164 ntBASIC10.9□□□□□ -0.66
MSH5O43196 RNU1-4-201ENST00000384659 164 ntBASIC10.9□□□□□ -0.66
MSH5O43196 RNU1-3-201ENST00000384782 164 ntBASIC10.9□□□□□ -0.66
MSH5O43196 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
MSH5O43196 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC10.9□□□□□ -0.66
MSH5O43196 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC10.9□□□□□ -0.66
MSH5O43196 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC10.9□□□□□ -0.66
MSH5O43196 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC10.9□□□□□ -0.66
MSH5O43196 RPS7P3-201ENST00000443360 580 ntBASIC10.9□□□□□ -0.66
MSH5O43196 TEX41-209ENST00000451478 452 ntTSL 2 BASIC10.9□□□□□ -0.66
MSH5O43196 AC119424.1-201ENST00000472513 350 ntTSL 5 BASIC10.9□□□□□ -0.66
MSH5O43196 AC083795.1-201ENST00000491760 320 ntBASIC10.9□□□□□ -0.66
MSH5O43196 AC109481.1-201ENST00000509173 282 ntBASIC10.9□□□□□ -0.66
MSH5O43196 RN7SKP43-201ENST00000516173 320 ntBASIC10.9□□□□□ -0.66
MSH5O43196 AC060775.1-201ENST00000518241 520 ntBASIC10.9□□□□□ -0.66
MSH5O43196 CYP4A27P-201ENST00000567218 190 ntBASIC10.9□□□□□ -0.66
MSH5O43196 U1.40-201ENST00000610976 164 ntBASIC10.9□□□□□ -0.66
MSH5O43196 AC006329.2-201ENST00000611491 394 ntBASIC10.9□□□□□ -0.66
MSH5O43196 U1.27-201ENST00000615842 164 ntBASIC10.9□□□□□ -0.66
MSH5O43196 SNORD39.4-201ENST00000620099 78 ntBASIC10.9□□□□□ -0.66
MSH5O43196 MIR6844-201ENST00000637122 62 ntBASIC10.9□□□□□ -0.66
MSH5O43196 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
MSH5O43196 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MSH5O43196 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
MSH5O43196 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
MSH5O43196 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC10.9□□□□□ -0.67
MSH5O43196 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
MSH5O43196 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
MSH5O43196 DDX10P1-201ENST00000448545 1933 ntBASIC10.9□□□□□ -0.67
MSH5O43196 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC10.9□□□□□ -0.67
MSH5O43196 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC10.9□□□□□ -0.67
MSH5O43196 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
MSH5O43196 HSPD1P4-201ENST00000547203 1702 ntBASIC10.89□□□□□ -0.67
MSH5O43196 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 AL592148.3-201ENST00000608771 2646 ntBASIC10.89□□□□□ -0.67
MSH5O43196 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
MSH5O43196 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
MSH5O43196 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
MSH5O43196 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
MSH5O43196 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
MSH5O43196 MTHFD2P2-201ENST00000407725 247 ntBASIC10.89□□□□□ -0.67
MSH5O43196 GSTA10P-201ENST00000412182 576 ntBASIC10.89□□□□□ -0.67
MSH5O43196 AC109638.1-201ENST00000417406 326 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms