RNA–Protein interactions for RNA: ENST00000255531.8

PCDH19-201, Transcript of protocadherin 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH19, Length 7,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-201ENST00000255531 PELP1Q8IZL8 1130 aaKnown RBP16.34■□□□□ 0.21
PCDH19-201ENST00000255531 MYT1Q01538 1121 aa15.94■□□□□ 0.14
PCDH19-201ENST00000255531 ERICH6Q7L0X2 663 aa15.62■□□□□ 0.09
PCDH19-201ENST00000255531 CCER1Q8TC90 406 aaPredicted RBP15.53■□□□□ 0.08
PCDH19-201ENST00000255531 YTHDC1Q96MU7 727 aaKnown RBP15.21■□□□□ 0.02
PCDH19-201ENST00000255531 TTBK1Q5TCY1 1321 aaPredicted RBP15.17■□□□□ 0.02
PCDH19-201ENST00000255531 CENPBP07199 599 aaPredicted RBP15.02■□□□□ -0
PCDH19-201ENST00000255531 NEFLP07196 543 aa14.75□□□□□ -0.05
PCDH19-201ENST00000255531 DAXXQ9UER7 740 aaPredicted RBP14.69□□□□□ -0.06
PCDH19-201ENST00000255531 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
PCDH19-201ENST00000255531 APLP2Q06481 763 aa14.5□□□□□ -0.09
PCDH19-201ENST00000255531 ZEB1P37275 1124 aaPredicted RBP14.47□□□□□ -0.09
PCDH19-201ENST00000255531 RTL5Q5HYW3 569 aaPredicted RBP14.41□□□□□ -0.1
PCDH19-201ENST00000255531 GLIPR1L2Q4G1C9 344 aa14.25□□□□□ -0.13
PCDH19-201ENST00000255531 ZNF316A6NFI3 1004 aaPredicted RBP14.24□□□□□ -0.13
PCDH19-201ENST00000255531 SUPT5HO00267 1087 aaKnown RBP14.23□□□□□ -0.13
PCDH19-201ENST00000255531 FAM9AQ8IZU1 332 aaPredicted RBP14.23□□□□□ -0.13
PCDH19-201ENST00000255531 PCGF6Q9BYE7 350 aa14.18□□□□□ -0.14
PCDH19-201ENST00000255531 EHMT2Q96KQ7 1210 aa14.14□□□□□ -0.15
PCDH19-201ENST00000255531 EIF5BO60841 1220 aaKnown RBP13.94□□□□□ -0.18
PCDH19-201ENST00000255531 CLSPNQ9HAW4 1339 aa13.92□□□□□ -0.18
PCDH19-201ENST00000255531 RANGAP1P46060 587 aaPredicted RBP13.82□□□□□ -0.2
PCDH19-201ENST00000255531 ANP32BQ92688 251 aaKnown RBP13.75□□□□□ -0.21
PCDH19-201ENST00000255531 MYT1LQ9UL68 1186 aa13.65□□□□□ -0.22
PCDH19-201ENST00000255531 CDK11AQ9UQ88 783 aaPredicted RBP13.64□□□□□ -0.23
PCDH19-201ENST00000255531 TNNT2P45379 298 aaPredicted RBP13.62□□□□□ -0.23
PCDH19-201ENST00000255531 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
PCDH19-201ENST00000255531 ATP1B4Q9UN42 357 aaPredicted RBP13.54□□□□□ -0.24
PCDH19-201ENST00000255531 ANP32AP39687 249 aaKnown RBP13.54□□□□□ -0.24
PCDH19-201ENST00000255531 POLR3GLQ9BT43 218 aa13.51□□□□□ -0.25
PCDH19-201ENST00000255531 HRCP23327 699 aa13.5□□□□□ -0.25
PCDH19-201ENST00000255531 SHROOM4Q9ULL8 1493 aa13.47□□□□□ -0.25
PCDH19-201ENST00000255531 CDK11BP21127 795 aaKnown RBP13.44□□□□□ -0.26
PCDH19-201ENST00000255531 TRIM26Q12899 539 aaPredicted RBP13.36□□□□□ -0.27
PCDH19-201ENST00000255531 TRIM44Q96DX7 344 aaPredicted RBP13.36□□□□□ -0.27
PCDH19-201ENST00000255531 DIEXFQ68CQ4 756 aaKnown RBP13.33□□□□□ -0.28
PCDH19-201ENST00000255531 GTF3C3Q9Y5Q9 886 aa13.33□□□□□ -0.28
PCDH19-201ENST00000255531 SLC4A1APQ9BWU0 796 aaKnown RBP13.32□□□□□ -0.28
PCDH19-201ENST00000255531 HSP90AA1P07900 732 aaKnown RBP13.32□□□□□ -0.28
PCDH19-201ENST00000255531 UBTFP17480 764 aaKnown RBP13.29□□□□□ -0.28
PCDH19-201ENST00000255531 NCLP19338 710 aaKnown RBP13.28□□□□□ -0.28
PCDH19-201ENST00000255531 CNGB1Q14028 1251 aaPredicted RBP13.28□□□□□ -0.28
PCDH19-201ENST00000255531 BCANQ96GW7 911 aa13.28□□□□□ -0.28
PCDH19-201ENST00000255531 UPF2Q9HAU5 1272 aaKnown RBP13.23□□□□□ -0.29
PCDH19-201ENST00000255531 CANXP27824 592 aaKnown RBP13.22□□□□□ -0.29
PCDH19-201ENST00000255531 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
PCDH19-201ENST00000255531 NEFMP07197 916 aa13.19□□□□□ -0.3
PCDH19-201ENST00000255531 NPM2Q86SE8 214 aaKnown RBP13.19□□□□□ -0.3
PCDH19-201ENST00000255531 ZNF326Q5BKZ1 582 aaKnown RBP13.14□□□□□ -0.31
PCDH19-201ENST00000255531 NBR1Q14596 966 aa13.12□□□□□ -0.31
PCDH19-201ENST00000255531 ANP32EQ9BTT0 268 aa13.11□□□□□ -0.31
PCDH19-201ENST00000255531 ANP32CO43423 234 aa13.1□□□□□ -0.31
PCDH19-201ENST00000255531 BCL11AQ9H165 835 aa13.08□□□□□ -0.32
PCDH19-201ENST00000255531 ERICH6BQ5W0A0 696 aa13.06□□□□□ -0.32
PCDH19-201ENST00000255531 ARXQ96QS3 562 aa13.06□□□□□ -0.32
PCDH19-201ENST00000255531 ITGAEP38570 1179 aa13.02□□□□□ -0.32
PCDH19-201ENST00000255531 CALRP27797 417 aaKnown RBP13.02□□□□□ -0.33
PCDH19-201ENST00000255531 DNTTIP2Q5QJE6 756 aaKnown RBP13.02□□□□□ -0.33
PCDH19-201ENST00000255531 SLC24A1O60721 1099 aa13.01□□□□□ -0.33
PCDH19-201ENST00000255531 AMER1Q5JTC6 1135 aaPredicted RBP13□□□□□ -0.33
PCDH19-201ENST00000255531 NAP1L5Q96NT1 182 aaPredicted RBP13□□□□□ -0.33
PCDH19-201ENST00000255531 PPARGC1BQ86YN6 1023 aaKnown RBP13□□□□□ -0.33
PCDH19-201ENST00000255531 ACIN1Q9UKV3 1341 aaKnown RBP12.97□□□□□ -0.33
PCDH19-201ENST00000255531 PTMAP06454 111 aaKnown RBP12.93□□□□□ -0.34
PCDH19-201ENST00000255531 GOLGA6L22H0YM25 854 aa12.91□□□□□ -0.34
PCDH19-201ENST00000255531 TNNT3P45378 269 aaPredicted RBP12.91□□□□□ -0.34
PCDH19-201ENST00000255531 NISCHQ9Y2I1 1504 aa12.91□□□□□ -0.34
PCDH19-201ENST00000255531 HNRNPUL2Q1KMD3 747 aaKnown RBP12.89□□□□□ -0.35
PCDH19-201ENST00000255531 CHIC1Q5VXU3 224 aa12.89□□□□□ -0.35
PCDH19-201ENST00000255531 DDRGK1Q96HY6 314 aa12.88□□□□□ -0.35
PCDH19-201ENST00000255531 BECN1Q14457 450 aa12.87□□□□□ -0.35
PCDH19-201ENST00000255531 ZRSR1Q15695 479 aaKnown RBP12.86□□□□□ -0.35
PCDH19-201ENST00000255531 CHAF1AQ13111 956 aaPredicted RBP12.85□□□□□ -0.35
PCDH19-201ENST00000255531 PTMSP20962 102 aa12.85□□□□□ -0.35
PCDH19-201ENST00000255531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
PCDH19-201ENST00000255531 GOLGA6L6A8MZA4 724 aa12.83□□□□□ -0.36
PCDH19-201ENST00000255531 FKBP8Q14318 412 aa12.82□□□□□ -0.36
PCDH19-201ENST00000255531 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.8□□□□□ -0.36
PCDH19-201ENST00000255531 NRDCO43847 1150 aa12.8□□□□□ -0.36
PCDH19-201ENST00000255531 L1TD1Q5T7N2 865 aaKnown RBP12.77□□□□□ -0.37
PCDH19-201ENST00000255531 CCDC136Q96JN2 1154 aa12.75□□□□□ -0.37
PCDH19-201ENST00000255531 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
PCDH19-201ENST00000255531 MSNP26038 577 aaKnown RBP12.71□□□□□ -0.38
PCDH19-201ENST00000255531 PPM1GO15355 546 aaPredicted RBP12.7□□□□□ -0.38
PCDH19-201ENST00000255531 SETQ01105 290 aaPredicted RBP12.7□□□□□ -0.38
PCDH19-201ENST00000255531 NEUROD1Q13562 356 aa12.69□□□□□ -0.38
PCDH19-201ENST00000255531 TRIM52Q96A61 297 aa12.66□□□□□ -0.38
PCDH19-201ENST00000255531 MYH16Q9H6N6 1097 aa12.66□□□□□ -0.38
PCDH19-201ENST00000255531 USP35Q9P2H5 1018 aa12.64□□□□□ -0.39
PCDH19-201ENST00000255531 GOLGA6L1Q8N7Z2 621 aa12.61□□□□□ -0.39
PCDH19-201ENST00000255531 FAM50AQ14320 339 aaKnown RBP12.6□□□□□ -0.39
PCDH19-201ENST00000255531 PLCB2Q00722 1185 aa12.58□□□□□ -0.4
PCDH19-201ENST00000255531 APPP05067 770 aa12.57□□□□□ -0.4
PCDH19-201ENST00000255531 NOC3LQ8WTT2 800 aaKnown RBP12.57□□□□□ -0.4
PCDH19-201ENST00000255531 HNRNPUQ00839 825 aaKnown RBP eCLIP12.57□□□□□ -0.4
PCDH19-201ENST00000255531 CASC1Q6TDU7 716 aa12.57□□□□□ -0.4
PCDH19-201ENST00000255531 PNNQ9H307 717 aaKnown RBP12.56□□□□□ -0.4
PCDH19-201ENST00000255531 KIAA2012Q0VF49 1180 aa12.54□□□□□ -0.4
PCDH19-201ENST00000255531 TULP1O00294 542 aaPredicted RBP12.51□□□□□ -0.41
PCDH19-201ENST00000255531 A0A0U1RQG5 324 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms