RNA–Protein interactions for RNA: ENST00000516173.1

RN7SKP43-201, Transcript of RNA, 7SK small nuclear pseudogene 43, humanhuman

BASIC

Gene RN7SKP43, Length 320 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP43-201ENST00000516173 AEBP2Q6ZN18 517 aaPredicted RBP14.01□□□□□ -0.17
RN7SKP43-201ENST00000516173 CHIC1Q5VXU3 224 aa13.13□□□□□ -0.31
RN7SKP43-201ENST00000516173 SENP3Q9H4L4 574 aaPredicted RBP12.11□□□□□ -0.47
RN7SKP43-201ENST00000516173 PHF23Q9BUL5 403 aaPredicted RBP11.81□□□□□ -0.52
RN7SKP43-201ENST00000516173 POTEDQ86YR6 584 aa11.73□□□□□ -0.53
RN7SKP43-201ENST00000516173 FOXD1Q16676 465 aa11.33□□□□□ -0.6
RN7SKP43-201ENST00000516173 MSH5O43196 834 aa10.9□□□□□ -0.66
RN7SKP43-201ENST00000516173 PIAS4Q8N2W9 510 aaPredicted RBP10.46□□□□□ -0.73
RN7SKP43-201ENST00000516173 PPP6R1Q9UPN7 881 aa10.05□□□□□ -0.8
RN7SKP43-201ENST00000516173 ADRA2BP18089 450 aa10□□□□□ -0.81
RN7SKP43-201ENST00000516173 PLPPR3Q6T4P5 718 aa9.85□□□□□ -0.83
RN7SKP43-201ENST00000516173 CACNB1Q02641 598 aaPredicted RBP9.74□□□□□ -0.85
RN7SKP43-201ENST00000516173 DMRT2Q9Y5R5 561 aa9.48□□□□□ -0.89
RN7SKP43-201ENST00000516173 MAPK8IP2Q13387 824 aaPredicted RBP9.36□□□□□ -0.91
RN7SKP43-201ENST00000516173 RNF39Q9H2S5 420 aa9.21□□□□□ -0.94
RN7SKP43-201ENST00000516173 SCAF1Q9H7N4 1312 aaKnown RBP9.19□□□□□ -0.94
RN7SKP43-201ENST00000516173 DCAF8L1A6NGE4 600 aa9.14□□□□□ -0.95
RN7SKP43-201ENST00000516173 POTEHQ6S545 545 aa9.08□□□□□ -0.96
RN7SKP43-201ENST00000516173 C1QBPQ07021 282 aaKnown RBP9.05□□□□□ -0.96
RN7SKP43-201ENST00000516173 HOXD11P31277 338 aaPredicted RBP8.86□□□□□ -0.99
RN7SKP43-201ENST00000516173 DNAJC5BQ9UF47 199 aa8.7□□□□□ -1.02
RN7SKP43-201ENST00000516173 RNF216Q9NWF9 866 aaPredicted RBP8.63□□□□□ -1.03
RN7SKP43-201ENST00000516173 CNKSR2Q8WXI2 1034 aa8.53□□□□□ -1.04
RN7SKP43-201ENST00000516173 PPP4R3CPQ6ZMV5 832 aa8.52□□□□□ -1.05
RN7SKP43-201ENST00000516173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.46□□□□□ -1.06
RN7SKP43-201ENST00000516173 DSG3P32926 999 aa8.4□□□□□ -1.06
RN7SKP43-201ENST00000516173 CAPN15O75808 1086 aa8.31□□□□□ -1.08
RN7SKP43-201ENST00000516173 SPINK5Q9NQ38 1064 aaPredicted RBP8.26□□□□□ -1.09
RN7SKP43-201ENST00000516173 SP7Q8TDD2 431 aaPredicted RBP8.2□□□□□ -1.1
RN7SKP43-201ENST00000516173 U3KPZ7 1027 aaPredicted RBP8.19□□□□□ -1.1
RN7SKP43-201ENST00000516173 CHRDL2Q6WN34 429 aa8.14□□□□□ -1.11
RN7SKP43-201ENST00000516173 RBM42Q9BTD8 480 aaKnown RBP8.07□□□□□ -1.12
RN7SKP43-201ENST00000516173 ABCB7O75027 752 aa8.05□□□□□ -1.12
RN7SKP43-201ENST00000516173 NCBP3Q53F19 620 aaKnown RBP8.03□□□□□ -1.12
RN7SKP43-201ENST00000516173 TRHP20396 242 aaPredicted RBP8.01□□□□□ -1.13
RN7SKP43-201ENST00000516173 ZNF219Q9P2Y4 722 aaPredicted RBP7.99□□□□□ -1.13
RN7SKP43-201ENST00000516173 APLP2Q06481 763 aa7.95□□□□□ -1.14
RN7SKP43-201ENST00000516173 NPM3O75607 178 aaKnown RBP7.89□□□□□ -1.15
RN7SKP43-201ENST00000516173 HAX1O00165 279 aa7.83□□□□□ -1.16
RN7SKP43-201ENST00000516173 PIP4P2Q8N4L2 257 aa7.79□□□□□ -1.16
RN7SKP43-201ENST00000516173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.76□□□□□ -1.17
RN7SKP43-201ENST00000516173 HNRNPUL2Q1KMD3 747 aaKnown RBP7.76□□□□□ -1.17
RN7SKP43-201ENST00000516173 PLSCR2Q9NRY7 297 aa7.76□□□□□ -1.17
RN7SKP43-201ENST00000516173 AKT1S1Q96B36 256 aa7.72□□□□□ -1.17
RN7SKP43-201ENST00000516173 SLC4A2P04920 1241 aa7.68□□□□□ -1.18
RN7SKP43-201ENST00000516173 SAMD1Q6SPF0 538 aaPredicted RBP7.68□□□□□ -1.18
RN7SKP43-201ENST00000516173 LHX8Q68G74 356 aa7.67□□□□□ -1.18
RN7SKP43-201ENST00000516173 EVX2Q03828 476 aa7.64□□□□□ -1.19
RN7SKP43-201ENST00000516173 REM2Q8IYK8 340 aaPredicted RBP7.64□□□□□ -1.19
RN7SKP43-201ENST00000516173 FXR2P51116 673 aaKnown RBP eCLIP7.63□□□□□ -1.19
RN7SKP43-201ENST00000516173 POLA2Q14181 598 aa7.62□□□□□ -1.19
RN7SKP43-201ENST00000516173 PITPNM1O00562 1244 aa7.58□□□□□ -1.2
RN7SKP43-201ENST00000516173 ZBTB12Q9Y330 459 aaPredicted RBP7.47□□□□□ -1.21
RN7SKP43-201ENST00000516173 GABBR2O75899 941 aa7.46□□□□□ -1.22
RN7SKP43-201ENST00000516173 OSCARQ8IYS5 282 aa7.43□□□□□ -1.22
RN7SKP43-201ENST00000516173 C19orf67A6NJJ6 358 aa7.42□□□□□ -1.22
RN7SKP43-201ENST00000516173 PRKAR2AP13861 404 aaKnown RBP7.37□□□□□ -1.23
RN7SKP43-201ENST00000516173 MYCNP04198 464 aaPredicted RBP7.34□□□□□ -1.23
RN7SKP43-201ENST00000516173 POTEIP0CG38 1075 aa7.29□□□□□ -1.24
RN7SKP43-201ENST00000516173 POTEMA6NI47 508 aa7.27□□□□□ -1.25
RN7SKP43-201ENST00000516173 POTEGQ6S5H5 508 aa7.22□□□□□ -1.25
RN7SKP43-201ENST00000516173 CLEC11AQ9Y240 323 aa7.22□□□□□ -1.25
RN7SKP43-201ENST00000516173 SPDYE1Q8NFV5 336 aaPredicted RBP7.21□□□□□ -1.26
RN7SKP43-201ENST00000516173 PCDH10Q9P2E7 1040 aa7.2□□□□□ -1.26
RN7SKP43-201ENST00000516173 ATF5Q9Y2D1 282 aaPredicted RBP7.17□□□□□ -1.26
RN7SKP43-201ENST00000516173 SPDYE2BA6NHP3 402 aa7.16□□□□□ -1.26
RN7SKP43-201ENST00000516173 SPDYE6P0CI01 402 aa7.16□□□□□ -1.26
RN7SKP43-201ENST00000516173 SPDYE2Q495Y8 402 aa7.16□□□□□ -1.26
RN7SKP43-201ENST00000516173 OTUD5Q96G74 571 aa7.16□□□□□ -1.26
RN7SKP43-201ENST00000516173 CLCN6P51797 869 aa7.15□□□□□ -1.26
RN7SKP43-201ENST00000516173 DCBLD2Q96PD2 775 aa7.15□□□□□ -1.26
RN7SKP43-201ENST00000516173 KCNA4P22459 653 aa7.13□□□□□ -1.27
RN7SKP43-201ENST00000516173 CHADLQ6NUI6 762 aa7.13□□□□□ -1.27
RN7SKP43-201ENST00000516173 CD44P16070 742 aaKnown RBP7.11□□□□□ -1.27
RN7SKP43-201ENST00000516173 POTEB2H3BUK9 544 aa7.02□□□□□ -1.29
RN7SKP43-201ENST00000516173 FBLN2P98095 1184 aa7□□□□□ -1.29
RN7SKP43-201ENST00000516173 PRR29P0C7W0 189 aa6.99□□□□□ -1.29
RN7SKP43-201ENST00000516173 SSUH2Q9Y2M2 353 aa6.98□□□□□ -1.29
RN7SKP43-201ENST00000516173 ZNF579Q8NAF0 562 aaKnown RBP6.97□□□□□ -1.29
RN7SKP43-201ENST00000516173 FARP1Q9Y4F1 1045 aaPredicted RBP6.96□□□□□ -1.3
RN7SKP43-201ENST00000516173 ZNF692Q9BU19 519 aaPredicted RBP6.95□□□□□ -1.3
RN7SKP43-201ENST00000516173 GALR2O43603 387 aaPredicted RBP6.92□□□□□ -1.3
RN7SKP43-201ENST00000516173 LCE2DQ5TA82 110 aaPredicted RBP6.92□□□□□ -1.3
RN7SKP43-201ENST00000516173 ZRANB1Q9UGI0 708 aa6.9□□□□□ -1.3
RN7SKP43-201ENST00000516173 FOXD4L1Q9NU39 408 aa6.89□□□□□ -1.31
RN7SKP43-201ENST00000516173 FAM163AQ96GL9 167 aaPredicted RBP6.88□□□□□ -1.31
RN7SKP43-201ENST00000516173 MAMSTRQ6ZN01 415 aa6.86□□□□□ -1.31
RN7SKP43-201ENST00000516173 PABPN1Q86U42 306 aaKnown RBP eCLIP6.83□□□□□ -1.32
RN7SKP43-201ENST00000516173 CDAN1Q8IWY9 1227 aa6.82□□□□□ -1.32
RN7SKP43-201ENST00000516173 PELP1Q8IZL8 1130 aaKnown RBP6.82□□□□□ -1.32
RN7SKP43-201ENST00000516173 METRNQ9UJH8 293 aa6.82□□□□□ -1.32
RN7SKP43-201ENST00000516173 POTEJP0CG39 1038 aa6.81□□□□□ -1.32
RN7SKP43-201ENST00000516173 MKRN4PQ13434 485 aaPredicted RBP6.81□□□□□ -1.32
RN7SKP43-201ENST00000516173 SCUBE2Q9NQ36 999 aa6.8□□□□□ -1.32
RN7SKP43-201ENST00000516173 SLC39A7Q92504 469 aa6.77□□□□□ -1.33
RN7SKP43-201ENST00000516173 C7P10643 843 aa6.76□□□□□ -1.33
RN7SKP43-201ENST00000516173 ATXN8OSP0DMR3 200 aa6.74□□□□□ -1.33
RN7SKP43-201ENST00000516173 PHF12Q96QT6 1004 aa6.74□□□□□ -1.33
RN7SKP43-201ENST00000516173 PAK3O75914 559 aaPredicted RBP6.73□□□□□ -1.33
RN7SKP43-201ENST00000516173 MMRN1Q13201 1228 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms