RNA–Protein interactions for RNA: ENST00000420912.1

AC004947.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC004947.1, Length 2,781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004947.1-201ENST00000420912 NISCHQ9Y2I1 1504 aa17.22■□□□□ 0.35
AC004947.1-201ENST00000420912 SHROOM4Q9ULL8 1493 aa14.85□□□□□ -0.03
AC004947.1-201ENST00000420912 DCAF8L2P0C7V8 631 aa14.67□□□□□ -0.06
AC004947.1-201ENST00000420912 CCDC180Q9P1Z9 1646 aa14.56□□□□□ -0.08
AC004947.1-201ENST00000420912 SUPT5HO00267 1087 aaKnown RBP14.51□□□□□ -0.09
AC004947.1-201ENST00000420912 ZCCHC6Q5VYS8 1495 aaKnown RBP14.5□□□□□ -0.09
AC004947.1-201ENST00000420912 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
AC004947.1-201ENST00000420912 CHIC1Q5VXU3 224 aa13.91□□□□□ -0.18
AC004947.1-201ENST00000420912 ABCC9O60706 1549 aa13.89□□□□□ -0.19
AC004947.1-201ENST00000420912 SCRIBQ14160 1630 aa13.83□□□□□ -0.2
AC004947.1-201ENST00000420912 MYO15BQ96JP2 1530 aa13.79□□□□□ -0.2
AC004947.1-201ENST00000420912 RSF1Q96T23 1441 aaPredicted RBP13.63□□□□□ -0.23
AC004947.1-201ENST00000420912 LOC105371045A0A1W2PR82 267 aa13.61□□□□□ -0.23
AC004947.1-201ENST00000420912 NACADO15069 1562 aa13.57□□□□□ -0.24
AC004947.1-201ENST00000420912 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
AC004947.1-201ENST00000420912 RB1CC1Q8TDY2 1594 aa13.46□□□□□ -0.26
AC004947.1-201ENST00000420912 FAM9AQ8IZU1 332 aaPredicted RBP13.45□□□□□ -0.26
AC004947.1-201ENST00000420912 TRIM41Q8WV44 630 aa13.45□□□□□ -0.26
AC004947.1-201ENST00000420912 EHMT2Q96KQ7 1210 aa13.44□□□□□ -0.26
AC004947.1-201ENST00000420912 PCGF6Q9BYE7 350 aa13.44□□□□□ -0.26
AC004947.1-201ENST00000420912 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
AC004947.1-201ENST00000420912 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
AC004947.1-201ENST00000420912 WIZO95785 1651 aa13.35□□□□□ -0.27
AC004947.1-201ENST00000420912 BAZ1AQ9NRL2 1556 aaPredicted RBP13.22□□□□□ -0.29
AC004947.1-201ENST00000420912 HRCP23327 699 aa13.2□□□□□ -0.3
AC004947.1-201ENST00000420912 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
AC004947.1-201ENST00000420912 AEBP2Q6ZN18 517 aaPredicted RBP13.15□□□□□ -0.3
AC004947.1-201ENST00000420912 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
AC004947.1-201ENST00000420912 PPARGC1BQ86YN6 1023 aaKnown RBP13.11□□□□□ -0.31
AC004947.1-201ENST00000420912 TRIM26Q12899 539 aaPredicted RBP13.09□□□□□ -0.31
AC004947.1-201ENST00000420912 CCDC88BA6NC98 1476 aa13.09□□□□□ -0.31
AC004947.1-201ENST00000420912 BICRAQ9NZM4 1560 aa13.07□□□□□ -0.32
AC004947.1-201ENST00000420912 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
AC004947.1-201ENST00000420912 ABCC8Q09428 1581 aa13.06□□□□□ -0.32
AC004947.1-201ENST00000420912 SMARCA2P51531 1590 aa13.01□□□□□ -0.33
AC004947.1-201ENST00000420912 EIF4G1Q04637 1599 aaKnown RBP12.97□□□□□ -0.33
AC004947.1-201ENST00000420912 TTBK1Q5TCY1 1321 aaPredicted RBP12.94□□□□□ -0.34
AC004947.1-201ENST00000420912 SOGA1O94964 1423 aa12.92□□□□□ -0.34
AC004947.1-201ENST00000420912 RUSC2Q8N2Y8 1516 aa12.88□□□□□ -0.35
AC004947.1-201ENST00000420912 ATAD2BQ9ULI0 1458 aa12.87□□□□□ -0.35
AC004947.1-201ENST00000420912 UBTFP17480 764 aaKnown RBP12.87□□□□□ -0.35
AC004947.1-201ENST00000420912 BAZ1BQ9UIG0 1483 aaKnown RBP12.84□□□□□ -0.35
AC004947.1-201ENST00000420912 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
AC004947.1-201ENST00000420912 WRNQ14191 1432 aaPredicted RBP eCLIP12.81□□□□□ -0.36
AC004947.1-201ENST00000420912 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
AC004947.1-201ENST00000420912 RANGAP1P46060 587 aaPredicted RBP12.79□□□□□ -0.36
AC004947.1-201ENST00000420912 CEP162Q5TB80 1403 aa12.75□□□□□ -0.37
AC004947.1-201ENST00000420912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.73□□□□□ -0.37
AC004947.1-201ENST00000420912 SYNJ1O43426 1573 aa12.72□□□□□ -0.37
AC004947.1-201ENST00000420912 TNIKQ9UKE5 1360 aa12.7□□□□□ -0.38
AC004947.1-201ENST00000420912 EEA1Q15075 1411 aa12.67□□□□□ -0.38
AC004947.1-201ENST00000420912 ZEB1P37275 1124 aaPredicted RBP12.66□□□□□ -0.38
AC004947.1-201ENST00000420912 GOLGA3Q08378 1498 aa12.65□□□□□ -0.39
AC004947.1-201ENST00000420912 CCER1Q8TC90 406 aaPredicted RBP12.64□□□□□ -0.39
AC004947.1-201ENST00000420912 NCAPD3P42695 1498 aa12.61□□□□□ -0.39
AC004947.1-201ENST00000420912 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
AC004947.1-201ENST00000420912 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
AC004947.1-201ENST00000420912 CLIP1P30622 1438 aa12.55□□□□□ -0.4
AC004947.1-201ENST00000420912 HMGXB3Q12766 1538 aa12.53□□□□□ -0.4
AC004947.1-201ENST00000420912 TOP2BQ02880 1626 aa12.53□□□□□ -0.4
AC004947.1-201ENST00000420912 HNRNPUL2Q1KMD3 747 aaKnown RBP12.52□□□□□ -0.4
AC004947.1-201ENST00000420912 APLP2Q06481 763 aa12.51□□□□□ -0.41
AC004947.1-201ENST00000420912 CUX1P39880 1505 aa12.5□□□□□ -0.41
AC004947.1-201ENST00000420912 KIF21BO75037 1637 aa12.49□□□□□ -0.41
AC004947.1-201ENST00000420912 CFTRP13569 1480 aa12.48□□□□□ -0.41
AC004947.1-201ENST00000420912 BIVM-ERCC5R4GMW8 1640 aa12.44□□□□□ -0.42
AC004947.1-201ENST00000420912 VPS8Q8N3P4 1428 aa12.43□□□□□ -0.42
AC004947.1-201ENST00000420912 KIF27Q86VH2 1401 aa12.42□□□□□ -0.42
AC004947.1-201ENST00000420912 CADPSQ9ULU8 1353 aa12.42□□□□□ -0.42
AC004947.1-201ENST00000420912 CC2D2AQ9P2K1 1620 aa12.41□□□□□ -0.42
AC004947.1-201ENST00000420912 PRXQ9BXM0 1461 aa12.4□□□□□ -0.42
AC004947.1-201ENST00000420912 KANK4Q5T7N3 995 aaPredicted RBP12.38□□□□□ -0.43
AC004947.1-201ENST00000420912 CUX2O14529 1486 aa12.37□□□□□ -0.43
AC004947.1-201ENST00000420912 DNAJC5BQ9UF47 199 aa12.36□□□□□ -0.43
AC004947.1-201ENST00000420912 IGF1RP08069 1367 aa12.33□□□□□ -0.44
AC004947.1-201ENST00000420912 NESP48681 1621 aa12.33□□□□□ -0.44
AC004947.1-201ENST00000420912 ARAP1Q96P48 1450 aa12.33□□□□□ -0.44
AC004947.1-201ENST00000420912 P3H3Q8IVL6 736 aa12.33□□□□□ -0.44
AC004947.1-201ENST00000420912 ERICH3Q5RHP9 1530 aa12.32□□□□□ -0.44
AC004947.1-201ENST00000420912 FGD5Q6ZNL6 1462 aa12.32□□□□□ -0.44
AC004947.1-201ENST00000420912 ITGAEP38570 1179 aa12.3□□□□□ -0.44
AC004947.1-201ENST00000420912 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
AC004947.1-201ENST00000420912 ATP1B4Q9UN42 357 aaPredicted RBP12.3□□□□□ -0.44
AC004947.1-201ENST00000420912 CARMIL1Q5VZK9 1371 aa12.29□□□□□ -0.44
AC004947.1-201ENST00000420912 DIEXFQ68CQ4 756 aaKnown RBP12.28□□□□□ -0.44
AC004947.1-201ENST00000420912 RAD54L2Q9Y4B4 1467 aa12.27□□□□□ -0.44
AC004947.1-201ENST00000420912 ARHGAP35Q9NRY4 1499 aa12.26□□□□□ -0.45
AC004947.1-201ENST00000420912 PRDM2Q13029 1718 aa12.23□□□□□ -0.45
AC004947.1-201ENST00000420912 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
AC004947.1-201ENST00000420912 POLA1P09884 1462 aaPredicted RBP12.18□□□□□ -0.46
AC004947.1-201ENST00000420912 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
AC004947.1-201ENST00000420912 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
AC004947.1-201ENST00000420912 DNMBPQ6XZF7 1577 aa12.14□□□□□ -0.47
AC004947.1-201ENST00000420912 FAM50AQ14320 339 aaKnown RBP12.13□□□□□ -0.47
AC004947.1-201ENST00000420912 CCNB3Q8WWL7 1395 aa12.13□□□□□ -0.47
AC004947.1-201ENST00000420912 FHOD3Q2V2M9 1422 aa12.12□□□□□ -0.47
AC004947.1-201ENST00000420912 SCAF1Q9H7N4 1312 aaKnown RBP12.12□□□□□ -0.47
AC004947.1-201ENST00000420912 URB2Q14146 1524 aaKnown RBP12.12□□□□□ -0.47
AC004947.1-201ENST00000420912 ABCA10Q8WWZ4 1543 aa12.1□□□□□ -0.47
AC004947.1-201ENST00000420912 DHX57Q6P158 1386 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms