RNA–Protein interactions for RNA: ENST00000390430.2

TRAV8-1-201, Transcript of T cell receptor alpha variable 8-1, humanhuman

APPRIS P1 BASIC

Gene TRAV8-1, Length 473 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1-201ENST00000390430 CHIC1Q5VXU3 224 aa15.37■□□□□ 0.05
TRAV8-1-201ENST00000390430 AEBP2Q6ZN18 517 aaPredicted RBP15.37■□□□□ 0.05
TRAV8-1-201ENST00000390430 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
TRAV8-1-201ENST00000390430 SENP3Q9H4L4 574 aaPredicted RBP12.98□□□□□ -0.33
TRAV8-1-201ENST00000390430 PLPPR3Q6T4P5 718 aa12.65□□□□□ -0.38
TRAV8-1-201ENST00000390430 FOXD1Q16676 465 aa12□□□□□ -0.49
TRAV8-1-201ENST00000390430 ADRA2BP18089 450 aa11.86□□□□□ -0.51
TRAV8-1-201ENST00000390430 PPP6R1Q9UPN7 881 aa11.85□□□□□ -0.51
TRAV8-1-201ENST00000390430 PIAS4Q8N2W9 510 aaPredicted RBP11.4□□□□□ -0.58
TRAV8-1-201ENST00000390430 KCNA4P22459 653 aa11.36□□□□□ -0.59
TRAV8-1-201ENST00000390430 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
TRAV8-1-201ENST00000390430 NCBP3Q53F19 620 aaKnown RBP11.01□□□□□ -0.65
TRAV8-1-201ENST00000390430 EHMT2Q96KQ7 1210 aa11□□□□□ -0.65
TRAV8-1-201ENST00000390430 MSH5O43196 834 aa10.91□□□□□ -0.66
TRAV8-1-201ENST00000390430 SLC4A1APQ9BWU0 796 aaKnown RBP10.89□□□□□ -0.67
TRAV8-1-201ENST00000390430 SCAF1Q9H7N4 1312 aaKnown RBP10.84□□□□□ -0.67
TRAV8-1-201ENST00000390430 NPM3O75607 178 aaKnown RBP10.84□□□□□ -0.67
TRAV8-1-201ENST00000390430 CNKSR2Q8WXI2 1034 aa10.8□□□□□ -0.68
TRAV8-1-201ENST00000390430 CSRNP3Q8WYN3 585 aa10.71□□□□□ -0.69
TRAV8-1-201ENST00000390430 MAPK8IP2Q13387 824 aaPredicted RBP10.65□□□□□ -0.7
TRAV8-1-201ENST00000390430 RNF216Q9NWF9 866 aaPredicted RBP10.5□□□□□ -0.73
TRAV8-1-201ENST00000390430 DNAJC5BQ9UF47 199 aa10.5□□□□□ -0.73
TRAV8-1-201ENST00000390430 ZBTB22O15209 634 aa10.47□□□□□ -0.73
TRAV8-1-201ENST00000390430 DMRT2Q9Y5R5 561 aa10.42□□□□□ -0.74
TRAV8-1-201ENST00000390430 HOXD11P31277 338 aaPredicted RBP10.36□□□□□ -0.75
TRAV8-1-201ENST00000390430 FOXD4L1Q9NU39 408 aa10.34□□□□□ -0.75
TRAV8-1-201ENST00000390430 SLC4A2P04920 1241 aa10.16□□□□□ -0.78
TRAV8-1-201ENST00000390430 MYCNP04198 464 aaPredicted RBP10.01□□□□□ -0.81
TRAV8-1-201ENST00000390430 ATXN8OSP0DMR3 200 aa9.96□□□□□ -0.82
TRAV8-1-201ENST00000390430 DCAF8L1A6NGE4 600 aa9.94□□□□□ -0.82
TRAV8-1-201ENST00000390430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRAV8-1-201ENST00000390430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.75□□□□□ -0.85
TRAV8-1-201ENST00000390430 HNRNPUL2Q1KMD3 747 aaKnown RBP9.75□□□□□ -0.85
TRAV8-1-201ENST00000390430 U3KPZ7 1027 aaPredicted RBP9.75□□□□□ -0.85
TRAV8-1-201ENST00000390430 SAMD1Q6SPF0 538 aaPredicted RBP9.73□□□□□ -0.85
TRAV8-1-201ENST00000390430 ATF5Q9Y2D1 282 aaPredicted RBP9.72□□□□□ -0.85
TRAV8-1-201ENST00000390430 POTEDQ86YR6 584 aa9.69□□□□□ -0.86
TRAV8-1-201ENST00000390430 FKBP8Q14318 412 aa9.65□□□□□ -0.86
TRAV8-1-201ENST00000390430 APLP2Q06481 763 aa9.56□□□□□ -0.88
TRAV8-1-201ENST00000390430 ZNF219Q9P2Y4 722 aaPredicted RBP9.53□□□□□ -0.88
TRAV8-1-201ENST00000390430 AMER1Q5JTC6 1135 aaPredicted RBP9.45□□□□□ -0.9
TRAV8-1-201ENST00000390430 RTN4Q9NQC3 1192 aaKnown RBP9.45□□□□□ -0.9
TRAV8-1-201ENST00000390430 RNF39Q9H2S5 420 aa9.4□□□□□ -0.9
TRAV8-1-201ENST00000390430 SPINK5Q9NQ38 1064 aaPredicted RBP9.37□□□□□ -0.91
TRAV8-1-201ENST00000390430 TRHP20396 242 aaPredicted RBP9.35□□□□□ -0.91
TRAV8-1-201ENST00000390430 MKRN4PQ13434 485 aaPredicted RBP9.32□□□□□ -0.92
TRAV8-1-201ENST00000390430 CAPN15O75808 1086 aa9.3□□□□□ -0.92
TRAV8-1-201ENST00000390430 C1QBPQ07021 282 aaKnown RBP9.3□□□□□ -0.92
TRAV8-1-201ENST00000390430 POLA2Q14181 598 aa9.3□□□□□ -0.92
TRAV8-1-201ENST00000390430 SPDYE4A6NLX3 237 aa9.29□□□□□ -0.92
TRAV8-1-201ENST00000390430 FBLN2P98095 1184 aa9.28□□□□□ -0.92
TRAV8-1-201ENST00000390430 FBXO3Q9UK99 471 aa9.21□□□□□ -0.94
TRAV8-1-201ENST00000390430 PROM2Q8N271 834 aa9.2□□□□□ -0.94
TRAV8-1-201ENST00000390430 ABCB7O75027 752 aa9.16□□□□□ -0.94
TRAV8-1-201ENST00000390430 ZBTB12Q9Y330 459 aaPredicted RBP9.16□□□□□ -0.94
TRAV8-1-201ENST00000390430 SLC24A1O60721 1099 aa9.15□□□□□ -0.94
TRAV8-1-201ENST00000390430 DSG3P32926 999 aa9.07□□□□□ -0.96
TRAV8-1-201ENST00000390430 VASPP50552 380 aaPredicted RBP9.07□□□□□ -0.96
TRAV8-1-201ENST00000390430 IFNLR1Q8IU57 520 aaPredicted RBP8.98□□□□□ -0.97
TRAV8-1-201ENST00000390430 ZNF692Q9BU19 519 aaPredicted RBP8.98□□□□□ -0.97
TRAV8-1-201ENST00000390430 OSCARQ8IYS5 282 aa8.96□□□□□ -0.98
TRAV8-1-201ENST00000390430 SPDYE2BA6NHP3 402 aa8.95□□□□□ -0.98
TRAV8-1-201ENST00000390430 SPDYE6P0CI01 402 aa8.95□□□□□ -0.98
TRAV8-1-201ENST00000390430 SPDYE2Q495Y8 402 aa8.95□□□□□ -0.98
TRAV8-1-201ENST00000390430 SSUH2Q9Y2M2 353 aa8.92□□□□□ -0.98
TRAV8-1-201ENST00000390430 STAG3Q9UJ98 1225 aa8.89□□□□□ -0.99
TRAV8-1-201ENST00000390430 CACNB1Q02641 598 aaPredicted RBP8.87□□□□□ -0.99
TRAV8-1-201ENST00000390430 PABPN1Q86U42 306 aaKnown RBP eCLIP8.86□□□□□ -0.99
TRAV8-1-201ENST00000390430 PKD2Q13563 968 aa8.83□□□□□ -1
TRAV8-1-201ENST00000390430 KLHL34Q8N239 644 aa8.83□□□□□ -1
TRAV8-1-201ENST00000390430 SPOCK2Q92563 424 aa8.81□□□□□ -1
TRAV8-1-201ENST00000390430 PLCD3Q8N3E9 789 aa8.79□□□□□ -1
TRAV8-1-201ENST00000390430 MIER1Q8N108 512 aa8.78□□□□□ -1
TRAV8-1-201ENST00000390430 DCAF8L2P0C7V8 631 aa8.76□□□□□ -1.01
TRAV8-1-201ENST00000390430 PLCB2Q00722 1185 aa8.73□□□□□ -1.01
TRAV8-1-201ENST00000390430 ECM2O94769 699 aaPredicted RBP8.7□□□□□ -1.02
TRAV8-1-201ENST00000390430 PLEKHG5O94827 1062 aa8.68□□□□□ -1.02
TRAV8-1-201ENST00000390430 ZBTB47Q9UFB7 747 aaPredicted RBP8.67□□□□□ -1.02
TRAV8-1-201ENST00000390430 RBM42Q9BTD8 480 aaKnown RBP8.62□□□□□ -1.03
TRAV8-1-201ENST00000390430 RGL2O15211 777 aa8.6□□□□□ -1.03
TRAV8-1-201ENST00000390430 AKT1S1Q96B36 256 aa8.6□□□□□ -1.03
TRAV8-1-201ENST00000390430 CIZ1Q9ULV3 898 aaPredicted RBP8.6□□□□□ -1.03
TRAV8-1-201ENST00000390430 HAP1P54257 671 aaPredicted RBP8.59□□□□□ -1.03
TRAV8-1-201ENST00000390430 SPDYE1Q8NFV5 336 aaPredicted RBP8.59□□□□□ -1.03
TRAV8-1-201ENST00000390430 NPM1P06748 294 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRAV8-1-201ENST00000390430 BBXQ8WY36 941 aaPredicted RBP8.58□□□□□ -1.04
TRAV8-1-201ENST00000390430 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.57□□□□□ -1.04
TRAV8-1-201ENST00000390430 TRIM41Q8WV44 630 aa8.54□□□□□ -1.04
TRAV8-1-201ENST00000390430 REM2Q8IYK8 340 aaPredicted RBP8.53□□□□□ -1.04
TRAV8-1-201ENST00000390430 CLEC11AQ9Y240 323 aa8.52□□□□□ -1.05
TRAV8-1-201ENST00000390430 PRR29P0C7W0 189 aa8.51□□□□□ -1.05
TRAV8-1-201ENST00000390430 NUBP1P53384 320 aa8.51□□□□□ -1.05
TRAV8-1-201ENST00000390430 GSE1Q14687 1217 aa8.51□□□□□ -1.05
TRAV8-1-201ENST00000390430 CREBZFQ9NS37 354 aa8.5□□□□□ -1.05
TRAV8-1-201ENST00000390430 PAXIP1Q6ZW49 1069 aaPredicted RBP8.49□□□□□ -1.05
TRAV8-1-201ENST00000390430 VSIG10Q8N0Z9 540 aa8.49□□□□□ -1.05
TRAV8-1-201ENST00000390430 CHGAP10645 457 aaKnown RBP8.48□□□□□ -1.05
TRAV8-1-201ENST00000390430 CFAP44Q96MT7 982 aa8.47□□□□□ -1.05
TRAV8-1-201ENST00000390430 MNX1P50219 401 aaPredicted RBP8.46□□□□□ -1.06
TRAV8-1-201ENST00000390430 DCAF8Q5TAQ9 597 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms