RNA–Protein interactions for RNA: ENST00000620099.1

SNORD39.4-201, humanhuman

BASIC

Gene SNORD39, Length 78 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD39.4-201ENST00000620099 AEBP2Q6ZN18 517 aaPredicted RBP14.88□□□□□ -0.03
SNORD39.4-201ENST00000620099 CHIC1Q5VXU3 224 aa14.66□□□□□ -0.06
SNORD39.4-201ENST00000620099 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
SNORD39.4-201ENST00000620099 SENP3Q9H4L4 574 aaPredicted RBP12.73□□□□□ -0.37
SNORD39.4-201ENST00000620099 PLPPR3Q6T4P5 718 aa11.97□□□□□ -0.49
SNORD39.4-201ENST00000620099 FOXD1Q16676 465 aa11.73□□□□□ -0.53
SNORD39.4-201ENST00000620099 PPP6R1Q9UPN7 881 aa11.29□□□□□ -0.6
SNORD39.4-201ENST00000620099 ADRA2BP18089 450 aa11.28□□□□□ -0.6
SNORD39.4-201ENST00000620099 PIAS4Q8N2W9 510 aaPredicted RBP11.09□□□□□ -0.63
SNORD39.4-201ENST00000620099 MSH5O43196 834 aa10.9□□□□□ -0.66
SNORD39.4-201ENST00000620099 PPP4R3CPQ6ZMV5 832 aa10.5□□□□□ -0.73
SNORD39.4-201ENST00000620099 SCAF1Q9H7N4 1312 aaKnown RBP10.48□□□□□ -0.73
SNORD39.4-201ENST00000620099 NCBP3Q53F19 620 aaKnown RBP10.32□□□□□ -0.76
SNORD39.4-201ENST00000620099 KCNA4P22459 653 aa10.26□□□□□ -0.77
SNORD39.4-201ENST00000620099 CNKSR2Q8WXI2 1034 aa10.24□□□□□ -0.77
SNORD39.4-201ENST00000620099 MAPK8IP2Q13387 824 aaPredicted RBP10.2□□□□□ -0.78
SNORD39.4-201ENST00000620099 DMRT2Q9Y5R5 561 aa10.15□□□□□ -0.78
SNORD39.4-201ENST00000620099 NPM3O75607 178 aaKnown RBP10.08□□□□□ -0.8
SNORD39.4-201ENST00000620099 RNF216Q9NWF9 866 aaPredicted RBP10.04□□□□□ -0.8
SNORD39.4-201ENST00000620099 HOXD11P31277 338 aaPredicted RBP9.98□□□□□ -0.81
SNORD39.4-201ENST00000620099 DNAJC5BQ9UF47 199 aa9.93□□□□□ -0.82
SNORD39.4-201ENST00000620099 SLC4A1APQ9BWU0 796 aaKnown RBP9.82□□□□□ -0.84
SNORD39.4-201ENST00000620099 POTEDQ86YR6 584 aa9.74□□□□□ -0.85
SNORD39.4-201ENST00000620099 DCAF8L1A6NGE4 600 aa9.63□□□□□ -0.87
SNORD39.4-201ENST00000620099 EHMT2Q96KQ7 1210 aa9.52□□□□□ -0.89
SNORD39.4-201ENST00000620099 FOXD4L1Q9NU39 408 aa9.5□□□□□ -0.89
SNORD39.4-201ENST00000620099 SLC4A2P04920 1241 aa9.49□□□□□ -0.89
SNORD39.4-201ENST00000620099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNORD39.4-201ENST00000620099 CSRNP3Q8WYN3 585 aa9.45□□□□□ -0.9
SNORD39.4-201ENST00000620099 ZBTB22O15209 634 aa9.42□□□□□ -0.9
SNORD39.4-201ENST00000620099 MYCNP04198 464 aaPredicted RBP9.36□□□□□ -0.91
SNORD39.4-201ENST00000620099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.33□□□□□ -0.92
SNORD39.4-201ENST00000620099 HNRNPUL2Q1KMD3 747 aaKnown RBP9.33□□□□□ -0.92
SNORD39.4-201ENST00000620099 RNF39Q9H2S5 420 aa9.3□□□□□ -0.92
SNORD39.4-201ENST00000620099 U3KPZ7 1027 aaPredicted RBP9.3□□□□□ -0.92
SNORD39.4-201ENST00000620099 SAMD1Q6SPF0 538 aaPredicted RBP9.26□□□□□ -0.93
SNORD39.4-201ENST00000620099 ATXN8OSP0DMR3 200 aa9.24□□□□□ -0.93
SNORD39.4-201ENST00000620099 APLP2Q06481 763 aa9.24□□□□□ -0.93
SNORD39.4-201ENST00000620099 C1QBPQ07021 282 aaKnown RBP9.24□□□□□ -0.93
SNORD39.4-201ENST00000620099 ZNF219Q9P2Y4 722 aaPredicted RBP9.03□□□□□ -0.96
SNORD39.4-201ENST00000620099 ATF5Q9Y2D1 282 aaPredicted RBP9□□□□□ -0.97
SNORD39.4-201ENST00000620099 CAPN15O75808 1086 aa8.99□□□□□ -0.97
SNORD39.4-201ENST00000620099 CACNB1Q02641 598 aaPredicted RBP8.99□□□□□ -0.97
SNORD39.4-201ENST00000620099 SPINK5Q9NQ38 1064 aaPredicted RBP8.99□□□□□ -0.97
SNORD39.4-201ENST00000620099 TRHP20396 242 aaPredicted RBP8.93□□□□□ -0.98
SNORD39.4-201ENST00000620099 DSG3P32926 999 aa8.84□□□□□ -0.99
SNORD39.4-201ENST00000620099 POLA2Q14181 598 aa8.84□□□□□ -0.99
SNORD39.4-201ENST00000620099 ZBTB12Q9Y330 459 aaPredicted RBP8.8□□□□□ -1
SNORD39.4-201ENST00000620099 ABCB7O75027 752 aa8.76□□□□□ -1.01
SNORD39.4-201ENST00000620099 FBLN2P98095 1184 aa8.73□□□□□ -1.01
SNORD39.4-201ENST00000620099 MKRN4PQ13434 485 aaPredicted RBP8.64□□□□□ -1.03
SNORD39.4-201ENST00000620099 SPDYE2BA6NHP3 402 aa8.53□□□□□ -1.04
SNORD39.4-201ENST00000620099 SPDYE6P0CI01 402 aa8.53□□□□□ -1.04
SNORD39.4-201ENST00000620099 SPDYE2Q495Y8 402 aa8.53□□□□□ -1.04
SNORD39.4-201ENST00000620099 FKBP8Q14318 412 aa8.52□□□□□ -1.05
SNORD39.4-201ENST00000620099 SPDYE4A6NLX3 237 aa8.51□□□□□ -1.05
SNORD39.4-201ENST00000620099 RBM42Q9BTD8 480 aaKnown RBP8.51□□□□□ -1.05
SNORD39.4-201ENST00000620099 OSCARQ8IYS5 282 aa8.49□□□□□ -1.05
SNORD39.4-201ENST00000620099 ZNF692Q9BU19 519 aaPredicted RBP8.45□□□□□ -1.06
SNORD39.4-201ENST00000620099 SSUH2Q9Y2M2 353 aa8.44□□□□□ -1.06
SNORD39.4-201ENST00000620099 PROM2Q8N271 834 aa8.42□□□□□ -1.06
SNORD39.4-201ENST00000620099 AKT1S1Q96B36 256 aa8.39□□□□□ -1.07
SNORD39.4-201ENST00000620099 FBXO3Q9UK99 471 aa8.33□□□□□ -1.08
SNORD39.4-201ENST00000620099 PABPN1Q86U42 306 aaKnown RBP eCLIP8.32□□□□□ -1.08
SNORD39.4-201ENST00000620099 STAG3Q9UJ98 1225 aa8.3□□□□□ -1.08
SNORD39.4-201ENST00000620099 REM2Q8IYK8 340 aaPredicted RBP8.26□□□□□ -1.09
SNORD39.4-201ENST00000620099 SPDYE1Q8NFV5 336 aaPredicted RBP8.25□□□□□ -1.09
SNORD39.4-201ENST00000620099 PITPNM1O00562 1244 aa8.14□□□□□ -1.11
SNORD39.4-201ENST00000620099 VASPP50552 380 aaPredicted RBP8.13□□□□□ -1.11
SNORD39.4-201ENST00000620099 CLEC11AQ9Y240 323 aa8.13□□□□□ -1.11
SNORD39.4-201ENST00000620099 PRR29P0C7W0 189 aa8.12□□□□□ -1.11
SNORD39.4-201ENST00000620099 PLEKHG5O94827 1062 aa8.1□□□□□ -1.11
SNORD39.4-201ENST00000620099 ZBTB47Q9UFB7 747 aaPredicted RBP8.07□□□□□ -1.12
SNORD39.4-201ENST00000620099 CHRDL2Q6WN34 429 aa8.06□□□□□ -1.12
SNORD39.4-201ENST00000620099 MIER1Q8N108 512 aa8.06□□□□□ -1.12
SNORD39.4-201ENST00000620099 PLCD3Q8N3E9 789 aa8.06□□□□□ -1.12
SNORD39.4-201ENST00000620099 FXR2P51116 673 aaKnown RBP eCLIP8.02□□□□□ -1.13
SNORD39.4-201ENST00000620099 IFNLR1Q8IU57 520 aaPredicted RBP8□□□□□ -1.13
SNORD39.4-201ENST00000620099 CREBZFQ9NS37 354 aa8□□□□□ -1.13
SNORD39.4-201ENST00000620099 KLHL34Q8N239 644 aa7.97□□□□□ -1.13
SNORD39.4-201ENST00000620099 PIP4P2Q8N4L2 257 aa7.96□□□□□ -1.14
SNORD39.4-201ENST00000620099 NPM1P06748 294 aaKnown RBP eCLIP7.94□□□□□ -1.14
SNORD39.4-201ENST00000620099 PRKAR2AP13861 404 aaKnown RBP7.94□□□□□ -1.14
SNORD39.4-201ENST00000620099 SPOCK2Q92563 424 aa7.94□□□□□ -1.14
SNORD39.4-201ENST00000620099 MNX1P50219 401 aaPredicted RBP7.93□□□□□ -1.14
SNORD39.4-201ENST00000620099 AMER1Q5JTC6 1135 aaPredicted RBP7.93□□□□□ -1.14
SNORD39.4-201ENST00000620099 FARP1Q9Y4F1 1045 aaPredicted RBP7.91□□□□□ -1.14
SNORD39.4-201ENST00000620099 CHADLQ6NUI6 762 aa7.9□□□□□ -1.14
SNORD39.4-201ENST00000620099 NUBP1P53384 320 aa7.85□□□□□ -1.15
SNORD39.4-201ENST00000620099 GSE1Q14687 1217 aa7.84□□□□□ -1.15
SNORD39.4-201ENST00000620099 TRIM41Q8WV44 630 aa7.82□□□□□ -1.16
SNORD39.4-201ENST00000620099 FAM212AQ96EL1 285 aa7.82□□□□□ -1.16
SNORD39.4-201ENST00000620099 RTN4Q9NQC3 1192 aaKnown RBP7.82□□□□□ -1.16
SNORD39.4-201ENST00000620099 PAK3O75914 559 aaPredicted RBP7.78□□□□□ -1.16
SNORD39.4-201ENST00000620099 RASEFQ8IZ41 740 aa7.78□□□□□ -1.16
SNORD39.4-201ENST00000620099 DCAF8Q5TAQ9 597 aa7.77□□□□□ -1.17
SNORD39.4-201ENST00000620099 CIZ1Q9ULV3 898 aaPredicted RBP7.76□□□□□ -1.17
SNORD39.4-201ENST00000620099 PKD2Q13563 968 aa7.75□□□□□ -1.17
SNORD39.4-201ENST00000620099 POTEHQ6S545 545 aa7.75□□□□□ -1.17
SNORD39.4-201ENST00000620099 C19orf67A6NJJ6 358 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms