Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.5■□□□□ 0.07
LSM4Q9Y4Z0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LSM4Q9Y4Z0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LSM4Q9Y4Z0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LSM4Q9Y4Z0 AC073648.6-201ENST00000641589 218 ntBASIC15.5■□□□□ 0.07
LSM4Q9Y4Z0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSM4Q9Y4Z0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LSM4Q9Y4Z0 CROCCP3-202ENST00000420820 1947 ntBASIC15.5■□□□□ 0.07
LSM4Q9Y4Z0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LSM4Q9Y4Z0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LSM4Q9Y4Z0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.5■□□□□ 0.07
LSM4Q9Y4Z0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSM4Q9Y4Z0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LSM4Q9Y4Z0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 UNC93B4-201ENST00000505679 747 ntBASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.48■□□□□ 0.07
LSM4Q9Y4Z0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 PHGDH-210ENST00000641115 1638 ntBASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 AC100791.3-201ENST00000617619 330 ntBASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSM4Q9Y4Z0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms