Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.79■□□□□ 0.44
LRFN1Q9P244 AP000692.2-201ENST00000608391 879 ntBASIC17.79■□□□□ 0.44
LRFN1Q9P244 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LRFN1Q9P244 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.79■□□□□ 0.44
LRFN1Q9P244 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.79■□□□□ 0.44
LRFN1Q9P244 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN1Q9P244 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.78■□□□□ 0.44
LRFN1Q9P244 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN1Q9P244 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.78■□□□□ 0.44
LRFN1Q9P244 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.78■□□□□ 0.44
LRFN1Q9P244 FAM207BP-201ENST00000447172 505 ntBASIC17.78■□□□□ 0.44
LRFN1Q9P244 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.78■□□□□ 0.44
LRFN1Q9P244 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.78■□□□□ 0.44
LRFN1Q9P244 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.78■□□□□ 0.44
LRFN1Q9P244 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LRFN1Q9P244 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LRFN1Q9P244 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN1Q9P244 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LRFN1Q9P244 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN1Q9P244 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN1Q9P244 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LRFN1Q9P244 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN1Q9P244 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN1Q9P244 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN1Q9P244 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LRFN1Q9P244 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
LRFN1Q9P244 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.77■□□□□ 0.44
LRFN1Q9P244 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LRFN1Q9P244 TMPOP1-202ENST00000424642 1267 ntBASIC17.77■□□□□ 0.44
LRFN1Q9P244 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.77■□□□□ 0.44
LRFN1Q9P244 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN1Q9P244 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN1Q9P244 AC010331.1-201ENST00000611423 582 ntBASIC17.77■□□□□ 0.44
LRFN1Q9P244 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LRFN1Q9P244 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN1Q9P244 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.77■□□□□ 0.43
LRFN1Q9P244 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRFN1Q9P244 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRFN1Q9P244 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRFN1Q9P244 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LRFN1Q9P244 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.77■□□□□ 0.43
LRFN1Q9P244 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRFN1Q9P244 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRFN1Q9P244 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN1Q9P244 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN1Q9P244 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN1Q9P244 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN1Q9P244 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN1Q9P244 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN1Q9P244 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN1Q9P244 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN1Q9P244 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN1Q9P244 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN1Q9P244 AC008040.2-201ENST00000461049 708 ntBASIC17.76■□□□□ 0.43
LRFN1Q9P244 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 Z85996.1-201ENST00000494644 937 ntBASIC17.76■□□□□ 0.43
LRFN1Q9P244 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN1Q9P244 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 RN7SL850P-201ENST00000579959 291 ntBASIC17.76■□□□□ 0.43
LRFN1Q9P244 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 AL157384.1-201ENST00000445995 2473 ntBASIC17.76■□□□□ 0.43
LRFN1Q9P244 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN1Q9P244 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
LRFN1Q9P244 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN1Q9P244 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN1Q9P244 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN1Q9P244 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN1Q9P244 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN1Q9P244 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 LINC01465-201ENST00000408887 1940 ntBASIC17.75■□□□□ 0.43
LRFN1Q9P244 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms