Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 AC125437.2-201ENST00000625180 2167 ntBASIC16.72■□□□□ 0.27
TREM2Q9NZC2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 AC018553.1-201ENST00000616682 1458 ntBASIC16.72■□□□□ 0.27
TREM2Q9NZC2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TREM2Q9NZC2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 PHGDH-210ENST00000641115 1638 ntBASIC16.71■□□□□ 0.27
TREM2Q9NZC2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 MIR4497-201ENST00000583208 89 ntBASIC16.71■□□□□ 0.27
TREM2Q9NZC2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 NBPF21P-201ENST00000425093 1451 ntBASIC16.71■□□□□ 0.27
TREM2Q9NZC2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREM2Q9NZC2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TREM2Q9NZC2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
TREM2Q9NZC2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TREM2Q9NZC2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms