Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DNAJC28Q9NX36 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 AC004408.2-201ENST00000623613 2777 ntBASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 KRT16P5-201ENST00000455284 522 ntBASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 HTR7P1-201ENST00000538670 1336 ntBASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 KRT8P20-201ENST00000423953 1409 ntBASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.66■□□□□ 0.74
DNAJC28Q9NX36 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 PTBP1P-201ENST00000554374 1601 ntBASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DNAJC28Q9NX36 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
DNAJC28Q9NX36 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
DNAJC28Q9NX36 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
DNAJC28Q9NX36 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
DNAJC28Q9NX36 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 AF186192.3-201ENST00000583427 947 ntBASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 LINC01023-201ENST00000606054 436 ntBASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 AL031963.3-201ENST00000606441 850 ntBASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DNAJC28Q9NX36 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DNAJC28Q9NX36 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNAJC28Q9NX36 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DNAJC28Q9NX36 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNAJC28Q9NX36 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DNAJC28Q9NX36 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
DNAJC28Q9NX36 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms