Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CISHQ9NSE2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CISHQ9NSE2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CISHQ9NSE2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CISHQ9NSE2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CISHQ9NSE2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.7■□□□□ 0.9
CISHQ9NSE2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CISHQ9NSE2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CISHQ9NSE2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.7■□□□□ 0.9
CISHQ9NSE2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.69■□□□□ 0.9
CISHQ9NSE2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CISHQ9NSE2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.69■□□□□ 0.9
CISHQ9NSE2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CISHQ9NSE2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CISHQ9NSE2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.69■□□□□ 0.9
CISHQ9NSE2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CISHQ9NSE2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.69■□□□□ 0.9
CISHQ9NSE2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CISHQ9NSE2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CISHQ9NSE2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CISHQ9NSE2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.69■□□□□ 0.9
CISHQ9NSE2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CISHQ9NSE2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.69■□□□□ 0.9
CISHQ9NSE2 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.69■□□□□ 0.9
CISHQ9NSE2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.69■□□□□ 0.9
CISHQ9NSE2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CISHQ9NSE2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CISHQ9NSE2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.69■□□□□ 0.9
CISHQ9NSE2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CISHQ9NSE2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.69■□□□□ 0.9
CISHQ9NSE2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CISHQ9NSE2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CISHQ9NSE2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.68■□□□□ 0.9
CISHQ9NSE2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CISHQ9NSE2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.68■□□□□ 0.9
CISHQ9NSE2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CISHQ9NSE2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.68■□□□□ 0.9
CISHQ9NSE2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CISHQ9NSE2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.68■□□□□ 0.9
CISHQ9NSE2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.68■□□□□ 0.9
CISHQ9NSE2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CISHQ9NSE2 RPS2P4-201ENST00000476944 856 ntBASIC20.68■□□□□ 0.9
CISHQ9NSE2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.68■□□□□ 0.9
CISHQ9NSE2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.68■□□□□ 0.9
CISHQ9NSE2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CISHQ9NSE2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CISHQ9NSE2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CISHQ9NSE2 AL135905.2-201ENST00000584934 1404 ntBASIC20.68■□□□□ 0.9
CISHQ9NSE2 SDHAP1-207ENST00000440850 2000 ntBASIC20.68■□□□□ 0.9
CISHQ9NSE2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CISHQ9NSE2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CISHQ9NSE2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.68■□□□□ 0.9
CISHQ9NSE2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.68■□□□□ 0.9
CISHQ9NSE2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CISHQ9NSE2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.67■□□□□ 0.9
CISHQ9NSE2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CISHQ9NSE2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.67■□□□□ 0.9
CISHQ9NSE2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CISHQ9NSE2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.67■□□□□ 0.9
CISHQ9NSE2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.67■□□□□ 0.9
CISHQ9NSE2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.67■□□□□ 0.9
CISHQ9NSE2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CISHQ9NSE2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.67■□□□□ 0.9
CISHQ9NSE2 AL445675.2-201ENST00000620291 557 ntBASIC20.67■□□□□ 0.9
CISHQ9NSE2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.67■□□□□ 0.9
CISHQ9NSE2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CISHQ9NSE2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CISHQ9NSE2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.67■□□□□ 0.9
CISHQ9NSE2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.67■□□□□ 0.9
CISHQ9NSE2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CISHQ9NSE2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CISHQ9NSE2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CISHQ9NSE2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.66■□□□□ 0.9
CISHQ9NSE2 AC005332.7-201ENST00000614046 2005 ntBASIC20.66■□□□□ 0.9
CISHQ9NSE2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CISHQ9NSE2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CISHQ9NSE2 RPS2P55-201ENST00000397318 883 ntBASIC20.66■□□□□ 0.9
CISHQ9NSE2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CISHQ9NSE2 KSR1P1-201ENST00000446298 240 ntBASIC20.66■□□□□ 0.9
CISHQ9NSE2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.66■□□□□ 0.9
CISHQ9NSE2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CISHQ9NSE2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CISHQ9NSE2 AC107956.1-201ENST00000494359 873 ntBASIC20.66■□□□□ 0.9
CISHQ9NSE2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.66■□□□□ 0.9
CISHQ9NSE2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.66■□□□□ 0.9
CISHQ9NSE2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.66■□□□□ 0.9
CISHQ9NSE2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.66■□□□□ 0.9
CISHQ9NSE2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CISHQ9NSE2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CISHQ9NSE2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CISHQ9NSE2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CISHQ9NSE2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CISHQ9NSE2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CISHQ9NSE2 AL032819.2-201ENST00000624543 2162 ntBASIC20.65■□□□□ 0.9
CISHQ9NSE2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CISHQ9NSE2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CISHQ9NSE2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.65■□□□□ 0.9
CISHQ9NSE2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.65■□□□□ 0.9
CISHQ9NSE2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CISHQ9NSE2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms