Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AL137013.1-201ENST00000432946 1228 ntBASIC20■□□□□ 0.79
VPS45Q9NRW7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20■□□□□ 0.79
VPS45Q9NRW7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20■□□□□ 0.79
VPS45Q9NRW7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
VPS45Q9NRW7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20■□□□□ 0.79
VPS45Q9NRW7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20■□□□□ 0.79
VPS45Q9NRW7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20■□□□□ 0.79
VPS45Q9NRW7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20■□□□□ 0.79
VPS45Q9NRW7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20■□□□□ 0.79
VPS45Q9NRW7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS45Q9NRW7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20■□□□□ 0.79
VPS45Q9NRW7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20■□□□□ 0.79
VPS45Q9NRW7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20■□□□□ 0.79
VPS45Q9NRW7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS45Q9NRW7 KRT18P22-201ENST00000402024 1347 ntBASIC20■□□□□ 0.79
VPS45Q9NRW7 TFP1-202ENST00000475455 1573 ntBASIC20■□□□□ 0.79
VPS45Q9NRW7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VPS45Q9NRW7 AC079598.2-202ENST00000546624 1451 ntBASIC19.99■□□□□ 0.79
VPS45Q9NRW7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 KRT18P57-201ENST00000443599 1254 ntBASIC19.99■□□□□ 0.79
VPS45Q9NRW7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 AP000525.1-201ENST00000608286 694 ntBASIC19.99■□□□□ 0.79
VPS45Q9NRW7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 KRT8P9-201ENST00000558927 1449 ntBASIC19.99■□□□□ 0.79
VPS45Q9NRW7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS45Q9NRW7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 MIR1238-201ENST00000408483 83 ntBASIC19.98■□□□□ 0.79
VPS45Q9NRW7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 NAPSB-206ENST00000562112 1266 ntBASIC19.98■□□□□ 0.79
VPS45Q9NRW7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 AL121906.2-201ENST00000621597 723 ntBASIC19.98■□□□□ 0.79
VPS45Q9NRW7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.98■□□□□ 0.79
VPS45Q9NRW7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 TERF1P1-201ENST00000311003 1181 ntBASIC19.97■□□□□ 0.79
VPS45Q9NRW7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 REXO1L10P-201ENST00000615707 1290 ntBASIC19.97■□□□□ 0.79
VPS45Q9NRW7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS45Q9NRW7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms