Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 REXO1L10P-201ENST00000615707 1290 ntBASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 REXO1L12P-201ENST00000622156 912 ntBASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
VRTNQ9H8Y1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 DGCR10-201ENST00000609839 495 ntBASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.65■□□□□ 0.9
VRTNQ9H8Y1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VRTNQ9H8Y1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
VRTNQ9H8Y1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VRTNQ9H8Y1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VRTNQ9H8Y1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 AC093484.2-201ENST00000580996 2166 ntBASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 AC008040.2-201ENST00000461049 708 ntBASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 AC091390.4-202ENST00000476426 537 ntBASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
VRTNQ9H8Y1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 AP000692.2-201ENST00000608391 879 ntBASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 AC011298.2-201ENST00000617989 482 ntBASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VRTNQ9H8Y1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
VRTNQ9H8Y1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.62■□□□□ 0.89
VRTNQ9H8Y1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VRTNQ9H8Y1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.62■□□□□ 0.89
VRTNQ9H8Y1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms