Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LITAFQ99732 SIRPAP1-201ENST00000448467 1770 ntBASIC12.91□□□□□ -0.34
LITAFQ99732 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.91□□□□□ -0.34
LITAFQ99732 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LITAFQ99732 AC106820.2-201ENST00000563775 3264 ntBASIC12.91□□□□□ -0.34
LITAFQ99732 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
LITAFQ99732 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LITAFQ99732 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LITAFQ99732 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
LITAFQ99732 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.9□□□□□ -0.34
LITAFQ99732 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.9□□□□□ -0.34
LITAFQ99732 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 RBM17P2-201ENST00000616397 1405 ntBASIC12.9□□□□□ -0.34
LITAFQ99732 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LITAFQ99732 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
LITAFQ99732 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
LITAFQ99732 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC12.9□□□□□ -0.34
LITAFQ99732 AC097381.1-201ENST00000429019 1296 ntBASIC12.9□□□□□ -0.34
LITAFQ99732 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 AC105265.2-201ENST00000467189 838 ntBASIC12.9□□□□□ -0.34
LITAFQ99732 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC12.9□□□□□ -0.34
LITAFQ99732 AC126763.1-201ENST00000552015 2118 ntBASIC12.9□□□□□ -0.34
LITAFQ99732 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LITAFQ99732 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LITAFQ99732 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.9□□□□□ -0.34
LITAFQ99732 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.9□□□□□ -0.34
LITAFQ99732 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LITAFQ99732 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC12.9□□□□□ -0.34
LITAFQ99732 AC073592.3-201ENST00000625118 1834 ntBASIC12.9□□□□□ -0.34
LITAFQ99732 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LITAFQ99732 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LITAFQ99732 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LITAFQ99732 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LITAFQ99732 AL162741.1-201ENST00000565563 1558 ntBASIC12.9□□□□□ -0.35
LITAFQ99732 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.9□□□□□ -0.35
LITAFQ99732 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.89□□□□□ -0.35
LITAFQ99732 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 TSPY26P-201ENST00000476365 1326 ntBASIC12.89□□□□□ -0.35
LITAFQ99732 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.89□□□□□ -0.35
LITAFQ99732 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
LITAFQ99732 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.89□□□□□ -0.35
LITAFQ99732 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC12.89□□□□□ -0.35
LITAFQ99732 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
LITAFQ99732 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
LITAFQ99732 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 CD44-222ENST00000526025 1052 ntTSL 2 BASIC12.89□□□□□ -0.35
LITAFQ99732 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC12.89□□□□□ -0.35
LITAFQ99732 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 AL355001.2-201ENST00000620617 1191 ntBASIC12.89□□□□□ -0.35
LITAFQ99732 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.89□□□□□ -0.35
LITAFQ99732 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC12.89□□□□□ -0.35
LITAFQ99732 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.89□□□□□ -0.35
LITAFQ99732 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms