Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL21A1Q96P44 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL21A1Q96P44 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL21A1Q96P44 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL21A1Q96P44 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 KRT17P3-201ENST00000420566 1262 ntBASIC18.29■□□□□ 0.52
COL21A1Q96P44 POU5F1P3-201ENST00000428824 1078 ntBASIC18.29■□□□□ 0.52
COL21A1Q96P44 FAM201B-201ENST00000458407 597 ntBASIC18.29■□□□□ 0.52
COL21A1Q96P44 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
COL21A1Q96P44 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL21A1Q96P44 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL21A1Q96P44 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.28■□□□□ 0.52
COL21A1Q96P44 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.28■□□□□ 0.52
COL21A1Q96P44 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COL21A1Q96P44 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL21A1Q96P44 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
COL21A1Q96P44 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL21A1Q96P44 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL21A1Q96P44 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.28■□□□□ 0.52
COL21A1Q96P44 TSPY20P-201ENST00000450910 630 ntBASIC18.28■□□□□ 0.52
COL21A1Q96P44 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
COL21A1Q96P44 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.28■□□□□ 0.52
COL21A1Q96P44 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.28■□□□□ 0.52
COL21A1Q96P44 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL21A1Q96P44 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL21A1Q96P44 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL21A1Q96P44 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.28■□□□□ 0.52
COL21A1Q96P44 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.28■□□□□ 0.52
COL21A1Q96P44 Z82202.1-201ENST00000623446 1880 ntBASIC18.28■□□□□ 0.52
COL21A1Q96P44 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL21A1Q96P44 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL21A1Q96P44 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.28■□□□□ 0.52
COL21A1Q96P44 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL21A1Q96P44 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL21A1Q96P44 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.27■□□□□ 0.52
COL21A1Q96P44 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL21A1Q96P44 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.27■□□□□ 0.52
COL21A1Q96P44 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.27■□□□□ 0.52
COL21A1Q96P44 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL21A1Q96P44 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL21A1Q96P44 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
COL21A1Q96P44 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.27■□□□□ 0.52
COL21A1Q96P44 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.27■□□□□ 0.52
COL21A1Q96P44 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
COL21A1Q96P44 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL21A1Q96P44 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
COL21A1Q96P44 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL21A1Q96P44 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL21A1Q96P44 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
COL21A1Q96P44 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.27■□□□□ 0.51
COL21A1Q96P44 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL21A1Q96P44 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL21A1Q96P44 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL21A1Q96P44 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL21A1Q96P44 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL21A1Q96P44 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.27■□□□□ 0.51
COL21A1Q96P44 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL21A1Q96P44 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL21A1Q96P44 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL21A1Q96P44 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
COL21A1Q96P44 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.26■□□□□ 0.51
COL21A1Q96P44 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL21A1Q96P44 AC124283.5-201ENST00000624661 1809 ntBASIC18.26■□□□□ 0.51
COL21A1Q96P44 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
COL21A1Q96P44 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL21A1Q96P44 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL21A1Q96P44 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL21A1Q96P44 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL21A1Q96P44 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL21A1Q96P44 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.26■□□□□ 0.51
COL21A1Q96P44 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms