Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.56■□□□□ 0.72
LRRC39Q96DD0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC39Q96DD0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 MIR4758-201ENST00000577688 71 ntBASIC19.55■□□□□ 0.72
LRRC39Q96DD0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC39Q96DD0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 SDHAP1-207ENST00000440850 2000 ntBASIC19.54■□□□□ 0.72
LRRC39Q96DD0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 SLC29A4P1-201ENST00000398760 971 ntBASIC19.54■□□□□ 0.72
LRRC39Q96DD0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 AC006970.2-201ENST00000450065 779 ntBASIC19.54■□□□□ 0.72
LRRC39Q96DD0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LRRC39Q96DD0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 FP475955.4-201ENST00000623131 1990 ntBASIC19.53■□□□□ 0.72
LRRC39Q96DD0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms