Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PGBD3Q8N328 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PGBD3Q8N328 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PGBD3Q8N328 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PGBD3Q8N328 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PGBD3Q8N328 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PGBD3Q8N328 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
PGBD3Q8N328 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PGBD3Q8N328 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.67■□□□□ 0.74
PGBD3Q8N328 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PGBD3Q8N328 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PGBD3Q8N328 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PGBD3Q8N328 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PGBD3Q8N328 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PGBD3Q8N328 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PGBD3Q8N328 AK4P3-201ENST00000418260 669 ntBASIC19.67■□□□□ 0.74
PGBD3Q8N328 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.67■□□□□ 0.74
PGBD3Q8N328 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
PGBD3Q8N328 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.67■□□□□ 0.74
PGBD3Q8N328 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.67■□□□□ 0.74
PGBD3Q8N328 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.67■□□□□ 0.74
PGBD3Q8N328 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PGBD3Q8N328 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PGBD3Q8N328 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PGBD3Q8N328 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.67■□□□□ 0.74
PGBD3Q8N328 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.67■□□□□ 0.74
PGBD3Q8N328 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PGBD3Q8N328 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PGBD3Q8N328 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PGBD3Q8N328 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PGBD3Q8N328 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.67■□□□□ 0.74
PGBD3Q8N328 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.67■□□□□ 0.74
PGBD3Q8N328 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.66■□□□□ 0.74
PGBD3Q8N328 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 INGX-201ENST00000359239 846 ntBASIC19.66■□□□□ 0.74
PGBD3Q8N328 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PGBD3Q8N328 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PGBD3Q8N328 FAM207BP-201ENST00000447172 505 ntBASIC19.66■□□□□ 0.74
PGBD3Q8N328 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.66■□□□□ 0.74
PGBD3Q8N328 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PGBD3Q8N328 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
PGBD3Q8N328 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
PGBD3Q8N328 AP000692.2-201ENST00000608391 879 ntBASIC19.66■□□□□ 0.74
PGBD3Q8N328 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.66■□□□□ 0.74
PGBD3Q8N328 AC006011.2-201ENST00000621313 1158 ntBASIC19.66■□□□□ 0.74
PGBD3Q8N328 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.66■□□□□ 0.74
PGBD3Q8N328 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PGBD3Q8N328 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PGBD3Q8N328 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PGBD3Q8N328 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.65■□□□□ 0.74
PGBD3Q8N328 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PGBD3Q8N328 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PGBD3Q8N328 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
PGBD3Q8N328 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.65■□□□□ 0.74
PGBD3Q8N328 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PGBD3Q8N328 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PGBD3Q8N328 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.65■□□□□ 0.74
PGBD3Q8N328 MFAP1P1-201ENST00000442257 1255 ntBASIC19.65■□□□□ 0.74
PGBD3Q8N328 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PGBD3Q8N328 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.65■□□□□ 0.74
PGBD3Q8N328 HLA-A-209ENST00000638375 975 ntBASIC19.65■□□□□ 0.74
PGBD3Q8N328 AC116562.4-202ENST00000641738 218 ntBASIC19.65■□□□□ 0.74
PGBD3Q8N328 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PGBD3Q8N328 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PGBD3Q8N328 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PGBD3Q8N328 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.65■□□□□ 0.74
PGBD3Q8N328 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PGBD3Q8N328 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.64■□□□□ 0.74
PGBD3Q8N328 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
PGBD3Q8N328 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
PGBD3Q8N328 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
PGBD3Q8N328 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PGBD3Q8N328 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.64■□□□□ 0.73
PGBD3Q8N328 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.64■□□□□ 0.73
PGBD3Q8N328 BX664615.1-201ENST00000443558 458 ntBASIC19.64■□□□□ 0.73
PGBD3Q8N328 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.64■□□□□ 0.73
PGBD3Q8N328 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.64■□□□□ 0.73
PGBD3Q8N328 LINC01238-205ENST00000567549 1107 ntBASIC19.64■□□□□ 0.73
PGBD3Q8N328 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.64■□□□□ 0.73
PGBD3Q8N328 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PGBD3Q8N328 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PGBD3Q8N328 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms