Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP2Q86T23 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 AC005332.8-201ENST00000622750 2735 ntBASIC19.69■□□□□ 0.74
CROCCP2Q86T23 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 AC096631.2-201ENST00000436136 790 ntBASIC19.69■□□□□ 0.74
CROCCP2Q86T23 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP2Q86T23 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 AC023632.3-201ENST00000521633 145 ntBASIC19.68■□□□□ 0.74
CROCCP2Q86T23 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP2Q86T23 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 MFSD11-216ENST00000590393 1141 ntBASIC19.67■□□□□ 0.74
CROCCP2Q86T23 AC100791.3-201ENST00000617619 330 ntBASIC19.67■□□□□ 0.74
CROCCP2Q86T23 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms