Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP4Q6PIL6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 AC006333.2-201ENST00000607957 2099 ntBASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 AC009237.14-201ENST00000609975 1594 ntBASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 AC006455.2-201ENST00000429931 906 ntBASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 AL138724.1-201ENST00000606771 1088 ntBASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 AP004607.4-201ENST00000530158 1459 ntBASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP4Q6PIL6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 AC139713.2-201ENST00000641328 2723 ntBASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 MIR3181-201ENST00000578512 73 ntBASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KCNIP4Q6PIL6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms