Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCR9P51686 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCR9P51686 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.06■□□□□ 0.32
CCR9P51686 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCR9P51686 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCR9P51686 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCR9P51686 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCR9P51686 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCR9P51686 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.05■□□□□ 0.32
CCR9P51686 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.05■□□□□ 0.32
CCR9P51686 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.05■□□□□ 0.32
CCR9P51686 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCR9P51686 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CCR9P51686 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.05■□□□□ 0.32
CCR9P51686 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.05■□□□□ 0.32
CCR9P51686 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.05■□□□□ 0.32
CCR9P51686 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 AC005332.8-201ENST00000622750 2735 ntBASIC17.05■□□□□ 0.32
CCR9P51686 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCR9P51686 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 CROCCP3-202ENST00000420820 1947 ntBASIC17.05■□□□□ 0.32
CCR9P51686 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.05■□□□□ 0.32
CCR9P51686 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCR9P51686 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.05■□□□□ 0.32
CCR9P51686 AL161938.1-201ENST00000569833 2180 ntBASIC17.05■□□□□ 0.32
CCR9P51686 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCR9P51686 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.04■□□□□ 0.32
CCR9P51686 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCR9P51686 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.04■□□□□ 0.32
CCR9P51686 AC020763.4-201ENST00000623414 4170 ntBASIC17.04■□□□□ 0.32
CCR9P51686 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 GPX1P1-201ENST00000388829 606 ntBASIC17.04■□□□□ 0.32
CCR9P51686 LSM12P1-201ENST00000411836 588 ntBASIC17.04■□□□□ 0.32
CCR9P51686 AC093787.1-201ENST00000450396 207 ntBASIC17.04■□□□□ 0.32
CCR9P51686 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.04■□□□□ 0.32
CCR9P51686 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCR9P51686 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.04■□□□□ 0.32
CCR9P51686 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
CCR9P51686 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CCR9P51686 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCR9P51686 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CCR9P51686 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCR9P51686 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCR9P51686 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.03■□□□□ 0.32
CCR9P51686 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCR9P51686 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.03■□□□□ 0.32
CCR9P51686 AC073210.2-201ENST00000430369 194 ntBASIC17.03■□□□□ 0.32
CCR9P51686 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.03■□□□□ 0.32
CCR9P51686 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCR9P51686 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.03■□□□□ 0.32
CCR9P51686 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.03■□□□□ 0.32
CCR9P51686 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.03■□□□□ 0.32
CCR9P51686 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CCR9P51686 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.03■□□□□ 0.32
CCR9P51686 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCR9P51686 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms