Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.982e-8■■■■□ 20.3
MATR3P43243 ZNF131-207ENST00000507218 1352 ntTSL 1 (best)8.87□□□□□ -0.996e-6■■■■□ 20.3
MATR3P43243 ZNF267-203ENST00000561814 563 ntTSL 48.75□□□□□ -1.014e-6■■■■□ 20.3
MATR3P43243 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.016e-6■■■■□ 20.3
MATR3P43243 BCL2L11-204ENST00000361493 443 ntTSL 1 (best)8.61□□□□□ -1.033e-6■■■■□ 20.3
MATR3P43243 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC8.61□□□□□ -1.032e-6■■■■□ 20.3
MATR3P43243 ZNF10-205ENST00000536877 472 ntTSL 48.59□□□□□ -1.032e-8■■■■□ 20.3
MATR3P43243 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.046e-6■■■■□ 20.3
MATR3P43243 NAA11-202ENST00000511542 1035 ntTSL 38.37□□□□□ -1.076e-6■■■■□ 20.3
MATR3P43243 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.16e-6■■■■□ 20.3
MATR3P43243 ATXN10-206ENST00000464482 439 ntTSL 38.16□□□□□ -1.11e-7■■■■□ 20.3
MATR3P43243 BCL2L11-216ENST00000452231 459 ntTSL 1 (best)7.99□□□□□ -1.133e-6■■■■□ 20.3
MATR3P43243 MUC4-218ENST00000478156 16562 ntTSL 57.88□□□□□ -1.156e-6■■■■□ 20.3
MATR3P43243 MUC4-211ENST00000466475 16443 ntTSL 57.56□□□□□ -1.26e-6■■■■□ 20.3
MATR3P43243 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.226e-6■■■■□ 20.3
MATR3P43243 BIRC6-209ENST00000471232 4226 ntTSL 27.25□□□□□ -1.256e-6■■■■□ 20.3
MATR3P43243 FAF2-204ENST00000510446 756 ntTSL 37.22□□□□□ -1.256e-6■■■■□ 20.3
MATR3P43243 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.276e-6■■■■□ 20.3
MATR3P43243 RAB2A-212ENST00000534260 410 ntTSL 46.78□□□□□ -1.323e-6■■■■□ 20.3
MATR3P43243 MUC4-217ENST00000477756 16401 ntTSL 56.56□□□□□ -1.366e-6■■■■□ 20.3
MATR3P43243 MUC4-221ENST00000480843 16245 ntTSL 56.51□□□□□ -1.376e-6■■■■□ 20.3
MATR3P43243 MUC4-214ENST00000470451 16169 ntTSL 56.4□□□□□ -1.386e-6■■■■□ 20.3
MATR3P43243 MUC4-208ENST00000462323 16197 ntTSL 56.4□□□□□ -1.386e-6■■■■□ 20.3
MATR3P43243 BCL2L11-208ENST00000415458 438 ntTSL 1 (best)6.31□□□□□ -1.43e-6■■■■□ 20.3
MATR3P43243 MUC4-216ENST00000477086 16353 ntTSL 56.26□□□□□ -1.416e-6■■■■□ 20.3
MATR3P43243 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.415e-7■■■■□ 20.3
MATR3P43243 BCL2L11-214ENST00000438054 656 ntTSL 56.11□□□□□ -1.432e-6■■■■□ 20.3
MATR3P43243 MUC4-220ENST00000479406 16075 ntTSL 56.1□□□□□ -1.436e-6■■■■□ 20.3
MATR3P43243 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.465e-7■■■■□ 20.3
MATR3P43243 ATRX-210ENST00000623316 803 ntTSL 55.88□□□□□ -1.478e-11■■■■□ 20.3
MATR3P43243 ARFIP1-206ENST00000509413 531 ntTSL 34.83□□□□□ -1.644e-8■■■■□ 20.3
MATR3P43243 RHOT1-206ENST00000578205 2771 ntTSL 1 (best)4.51□□□□□ -1.696e-6■■■■□ 20.3
MATR3P43243 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.36□□□□□ -1.716e-6■■■■□ 20.3
MATR3P43243 ATRX-212ENST00000623706 7245 ntTSL 24.21□□□□□ -1.745e-7■■■■□ 20.3
MATR3P43243 RHOT1-208ENST00000580976 567 ntTSL 44.21□□□□□ -1.746e-6■■■■□ 20.3
MATR3P43243 ATRX-206ENST00000480283 10455 ntTSL 1 (best)4.16□□□□□ -1.745e-7■■■■□ 20.3
MATR3P43243 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.94□□□□□ -1.786e-6■■■■□ 20.3
MATR3P43243 GDI2-205ENST00000447751 834 ntTSL 33.42□□□□□ -1.866e-8■■■■□ 20.3
MATR3P43243 RAB2A-210ENST00000531098 566 ntTSL 23.05□□□□□ -1.923e-6■■■■□ 20.3
MATR3P43243 SMYD3-215ENST00000490322 368 ntTSL 32.99□□□□□ -1.936e-6■■■■□ 20.3
MATR3P43243 ZNF131-210ENST00000508259 501 ntTSL 52.59□□□□□ -1.996e-6■■■■□ 20.3
MATR3P43243 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.13e-6■■■■□ 20.3
MATR3P43243 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.282e-7■■■■□ 20.3
MATR3P43243 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.29■■□□□ 1.162e-7■■■■□ 20.3
MATR3P43243 CNOT2-206ENST00000547780 582 ntTSL 523.64■■□□□ 1.372e-6■■■■□ 20.3
MATR3P43243 CNOT2-236ENST00000552231 1545 ntTSL 218.92■□□□□ 0.622e-6■■■■□ 20.3
MATR3P43243 CNOT2-220ENST00000549750 1085 ntTSL 514.86□□□□□ -0.032e-6■■■■□ 20.3
MATR3P43243 CNOT2-241ENST00000552915 1071 ntTSL 513.32□□□□□ -0.282e-6■■■■□ 20.3
MATR3P43243 CNOT2-239ENST00000552483 895 ntTSL 511.87□□□□□ -0.512e-6■■■■□ 20.3
MATR3P43243 CNOT2-205ENST00000547321 577 ntTSL 211.08□□□□□ -0.642e-6■■■■□ 20.3
MATR3P43243 CNOT2-228ENST00000551132 618 ntTSL 311.08□□□□□ -0.642e-6■■■■□ 20.3
MATR3P43243 CNOT2-242ENST00000553020 576 ntTSL 511.08□□□□□ -0.642e-6■■■■□ 20.3
MATR3P43243 CNOT2-232ENST00000551661 571 ntTSL 49.97□□□□□ -0.812e-6■■■■□ 20.3
MATR3P43243 CNOT2-225ENST00000550641 964 ntTSL 59.14□□□□□ -0.952e-6■■■■□ 20.3
MATR3P43243 CNOT2-208ENST00000548021 724 ntTSL 29.14□□□□□ -0.952e-6■■■■□ 20.3
MATR3P43243 CNOT2-217ENST00000549443 457 ntTSL 47.97□□□□□ -1.132e-6■■■■□ 20.3
MATR3P43243 CNOT2-237ENST00000552319 783 ntTSL 57.97□□□□□ -1.132e-6■■■■□ 20.3
MATR3P43243 CNOT2-238ENST00000552422 443 ntTSL 37.22□□□□□ -1.252e-6■■■■□ 20.3
MATR3P43243 RERE-213ENST00000480342 2710 ntTSL 211.14□□□□□ -0.639e-7■■■■□ 20.3
MATR3P43243 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.325e-7■■■■□ 20.3
MATR3P43243 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.545e-7■■■■□ 20.3
MATR3P43243 AC005726.2-201ENST00000481916 2091 ntTSL 1 (best)23.1■■□□□ 1.292e-7■■■■□ 20.3
MATR3P43243 AC005726.2-203ENST00000584196 2103 ntTSL 220.88■□□□□ 0.932e-7■■■■□ 20.3
MATR3P43243 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.47■□□□□ 0.072e-7■■■■□ 20.3
MATR3P43243 AC005726.2-202ENST00000531839 1033 ntAPPRIS P5 TSL 212.65□□□□□ -0.382e-7■■■■□ 20.3
MATR3P43243 SGK494-201ENST00000301037 1233 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.412e-7■■■■□ 20.3
MATR3P43243 SGK494-211ENST00000579457 2975 nt9.21□□□□□ -0.932e-7■■■■□ 20.3
MATR3P43243 SGK494-210ENST00000578956 921 ntTSL 1 (best)9.11□□□□□ -0.952e-7■■■■□ 20.3
MATR3P43243 SGK494-204ENST00000494272 829 ntTSL 36.3□□□□□ -1.42e-7■■■■□ 20.3
MATR3P43243 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.5■■□□□ 1.352e-6■■■■□ 20.3
MATR3P43243 MED15-230ENST00000492381 3619 ntTSL 212.14□□□□□ -0.472e-7■■■■□ 20.3
MATR3P43243 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.535e-7■■■■□ 20.3
MATR3P43243 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.1□□□□□ -1.115e-7■■■■□ 20.3
MATR3P43243 PKN1-204ENST00000585839 3518 ntTSL 221.02■□□□□ 0.962e-6■■■■□ 20.3
MATR3P43243 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.912e-6■■■■□ 20.3
MATR3P43243 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.93■□□□□ 0.32e-6■■■■□ 20.3
MATR3P43243 HDAC4-216ENST00000544989 342 ntTSL 512.92□□□□□ -0.342e-6■■■■□ 20.3
MATR3P43243 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.888e-7■■■■□ 20.3
MATR3P43243 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.89□□□□□ -1.158e-7■■■■□ 20.3
MATR3P43243 SORT1-207ENST00000493736 583 ntTSL 25.33□□□□□ -1.568e-7■■■■□ 20.3
MATR3P43243 AC087482.1-202ENST00000558071 903 ntTSL 5 BASIC11.26□□□□□ -0.611e-6■■■■□ 20.2
MATR3P43243 GMDS-207ENST00000530459 520 ntTSL 35.48□□□□□ -1.532e-6■■■■□ 20.2
MATR3P43243 VSNL1-206ENST00000483921 561 ntTSL 417.27■□□□□ 0.365e-7■■■■□ 20.2
MATR3P43243 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.13■□□□□ 0.651e-6■■■■□ 20.2
MATR3P43243 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.261e-6■■■■□ 20.2
MATR3P43243 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.291e-6■■■■□ 20.2
MATR3P43243 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.95□□□□□ -0.021e-7■■■■□ 20.2
MATR3P43243 CHN2-221ENST00000478128 459 ntTSL 413.42□□□□□ -0.268e-10■■■■□ 20.2
MATR3P43243 CHN2-207ENST00000412536 575 ntTSL 410.89□□□□□ -0.678e-10■■■■□ 20.2
MATR3P43243 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC10.63□□□□□ -0.711e-7■■■■□ 20.2
MATR3P43243 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC10.28□□□□□ -0.761e-7■■■■□ 20.2
MATR3P43243 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.861e-7■■■■□ 20.2
MATR3P43243 CHN2-222ENST00000482820 498 ntTSL 59.62□□□□□ -0.878e-10■■■■□ 20.2
MATR3P43243 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.196e-8■■■■□ 20.2
MATR3P43243 MTF2-205ENST00000471953 1937 ntTSL 27.14□□□□□ -1.271e-7■■■■□ 20.2
MATR3P43243 CHN2-223ENST00000483081 491 ntTSL 56.61□□□□□ -1.358e-10■■■■□ 20.2
MATR3P43243 MTF2-203ENST00000467953 1870 ntTSL 1 (best)6.19□□□□□ -1.421e-7■■■■□ 20.2
MATR3P43243 MTF2-209ENST00000487263 863 ntTSL 36.18□□□□□ -1.421e-7■■■■□ 20.2
MATR3P43243 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.66e-8■■■■□ 20.2
MATR3P43243 MTF2-210ENST00000489480 1381 ntTSL 1 (best)4.5□□□□□ -1.691e-7■■■■□ 20.2
Retrieved 100 of 16,209 protein–RNA pairs in 93.2 ms