RNA–Protein interactions for RNA: ENST00000623316.1

ATRX-210, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 803 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-210ENST00000623316 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
ATRX-210ENST00000623316 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
ATRX-210ENST00000623316 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
ATRX-210ENST00000623316 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
ATRX-210ENST00000623316 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
ATRX-210ENST00000623316 ADRA2BP18089 450 aa16.87■□□□□ 0.29
ATRX-210ENST00000623316 FOXD1Q16676 465 aa16.76■□□□□ 0.27
ATRX-210ENST00000623316 PPP6R1Q9UPN7 881 aa16.72■□□□□ 0.27
ATRX-210ENST00000623316 KCNA4P22459 653 aa16.5■□□□□ 0.23
ATRX-210ENST00000623316 EHMT2Q96KQ7 1210 aa16.32■□□□□ 0.2
ATRX-210ENST00000623316 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
ATRX-210ENST00000623316 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
ATRX-210ENST00000623316 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
ATRX-210ENST00000623316 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
ATRX-210ENST00000623316 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
ATRX-210ENST00000623316 NPM3O75607 178 aaKnown RBP15.56■□□□□ 0.08
ATRX-210ENST00000623316 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
ATRX-210ENST00000623316 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
ATRX-210ENST00000623316 ZBTB22O15209 634 aa15.17■□□□□ 0.02
ATRX-210ENST00000623316 MSH5O43196 834 aa15.16■□□□□ 0.02
ATRX-210ENST00000623316 MAPK8IP2Q13387 824 aaPredicted RBP14.99□□□□□ -0.01
ATRX-210ENST00000623316 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
ATRX-210ENST00000623316 DNAJC5BQ9UF47 199 aa14.91□□□□□ -0.02
ATRX-210ENST00000623316 RNF216Q9NWF9 866 aaPredicted RBP14.87□□□□□ -0.03
ATRX-210ENST00000623316 DMRT2Q9Y5R5 561 aa14.61□□□□□ -0.07
ATRX-210ENST00000623316 HOXD11P31277 338 aaPredicted RBP14.6□□□□□ -0.07
ATRX-210ENST00000623316 SLC4A2P04920 1241 aa14.49□□□□□ -0.09
ATRX-210ENST00000623316 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
ATRX-210ENST00000623316 ATXN8OSP0DMR3 200 aa14.34□□□□□ -0.11
ATRX-210ENST00000623316 AMER1Q5JTC6 1135 aaPredicted RBP14.27□□□□□ -0.13
ATRX-210ENST00000623316 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.13
ATRX-210ENST00000623316 POTEDQ86YR6 584 aa14.25□□□□□ -0.13
ATRX-210ENST00000623316 FKBP8Q14318 412 aa14.21□□□□□ -0.13
ATRX-210ENST00000623316 SLC24A1O60721 1099 aa14.15□□□□□ -0.14
ATRX-210ENST00000623316 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
ATRX-210ENST00000623316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.97□□□□□ -0.174e-7■■■■□ 23.1
ATRX-210ENST00000623316 ATF5Q9Y2D1 282 aaPredicted RBP13.92□□□□□ -0.18
ATRX-210ENST00000623316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.9□□□□□ -0.18
ATRX-210ENST00000623316 HNRNPUL2Q1KMD3 747 aaKnown RBP13.9□□□□□ -0.18
ATRX-210ENST00000623316 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
ATRX-210ENST00000623316 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
ATRX-210ENST00000623316 ZNF219Q9P2Y4 722 aaPredicted RBP13.62□□□□□ -0.23
ATRX-210ENST00000623316 APLP2Q06481 763 aa13.58□□□□□ -0.24
ATRX-210ENST00000623316 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
ATRX-210ENST00000623316 SPDYE4A6NLX3 237 aa13.45□□□□□ -0.26
ATRX-210ENST00000623316 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
ATRX-210ENST00000623316 FBLN2P98095 1184 aa13.32□□□□□ -0.28
ATRX-210ENST00000623316 VASPP50552 380 aaPredicted RBP13.27□□□□□ -0.29
ATRX-210ENST00000623316 PROM2Q8N271 834 aa13.27□□□□□ -0.29
ATRX-210ENST00000623316 TRHP20396 242 aaPredicted RBP13.26□□□□□ -0.29
ATRX-210ENST00000623316 NISCHQ9Y2I1 1504 aa13.2□□□□□ -0.3
ATRX-210ENST00000623316 POLA2Q14181 598 aa13.2□□□□□ -0.3
ATRX-210ENST00000623316 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
ATRX-210ENST00000623316 PLCB2Q00722 1185 aa13.15□□□□□ -0.3
ATRX-210ENST00000623316 CAPN15O75808 1086 aa13.14□□□□□ -0.31
ATRX-210ENST00000623316 IFNLR1Q8IU57 520 aaPredicted RBP13.14□□□□□ -0.31
ATRX-210ENST00000623316 DCAF8L2P0C7V8 631 aa13.12□□□□□ -0.31
ATRX-210ENST00000623316 RNF39Q9H2S5 420 aa13.05□□□□□ -0.32
ATRX-210ENST00000623316 ZBTB12Q9Y330 459 aaPredicted RBP13.03□□□□□ -0.32
ATRX-210ENST00000623316 HAP1P54257 671 aaPredicted RBP13.01□□□□□ -0.33
ATRX-210ENST00000623316 PKD2Q13563 968 aa12.98□□□□□ -0.33
ATRX-210ENST00000623316 ABCB7O75027 752 aa12.95□□□□□ -0.34
ATRX-210ENST00000623316 C1QBPQ07021 282 aaKnown RBP12.95□□□□□ -0.34
ATRX-210ENST00000623316 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
ATRX-210ENST00000623316 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
ATRX-210ENST00000623316 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
ATRX-210ENST00000623316 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
ATRX-210ENST00000623316 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
ATRX-210ENST00000623316 VSIG10Q8N0Z9 540 aa12.79□□□□□ -0.36
ATRX-210ENST00000623316 BCANQ96GW7 911 aa12.78□□□□□ -0.36
ATRX-210ENST00000623316 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
ATRX-210ENST00000623316 PLCD3Q8N3E9 789 aa12.77□□□□□ -0.37
ATRX-210ENST00000623316 BBXQ8WY36 941 aaPredicted RBP12.75□□□□□ -0.37
ATRX-210ENST00000623316 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
ATRX-210ENST00000623316 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
ATRX-210ENST00000623316 SPDYE2Q495Y8 402 aa12.73□□□□□ -0.37
ATRX-210ENST00000623316 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
ATRX-210ENST00000623316 DSG3P32926 999 aa12.69□□□□□ -0.38
ATRX-210ENST00000623316 MIER1Q8N108 512 aa12.69□□□□□ -0.38
ATRX-210ENST00000623316 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
ATRX-210ENST00000623316 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
ATRX-210ENST00000623316 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
ATRX-210ENST00000623316 NPM1P06748 294 aaKnown RBP eCLIP12.67□□□□□ -0.38
ATRX-210ENST00000623316 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
ATRX-210ENST00000623316 RGL2O15211 777 aa12.63□□□□□ -0.39
ATRX-210ENST00000623316 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
ATRX-210ENST00000623316 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.4
ATRX-210ENST00000623316 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
ATRX-210ENST00000623316 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
ATRX-210ENST00000623316 PRKCSHP14314 528 aaPredicted RBP12.56□□□□□ -0.4
ATRX-210ENST00000623316 SPRYD3Q8NCJ5 442 aa12.55□□□□□ -0.4
ATRX-210ENST00000623316 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
ATRX-210ENST00000623316 CHGAP10645 457 aaKnown RBP12.5□□□□□ -0.41
ATRX-210ENST00000623316 TSHZ2Q9NRE2 1034 aa12.45□□□□□ -0.42
ATRX-210ENST00000623316 TRIM41Q8WV44 630 aa12.43□□□□□ -0.42
ATRX-210ENST00000623316 TPRNQ4KMQ1 711 aa12.42□□□□□ -0.42
ATRX-210ENST00000623316 GSE1Q14687 1217 aa12.34□□□□□ -0.43
ATRX-210ENST00000623316 HS6ST3Q8IZP7 471 aa12.34□□□□□ -0.43
ATRX-210ENST00000623316 RNF25Q96BH1 459 aaPredicted RBP12.27□□□□□ -0.45
ATRX-210ENST00000623316 DCAF8Q5TAQ9 597 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms