RNA–Protein interactions for RNA: ENST00000509413.1

ARFIP1-206, Transcript of ADP ribosylation factor interacting protein 1, humanhuman

TSL 3

Gene ARFIP1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP1-206ENST00000509413 AEBP2Q6ZN18 517 aaPredicted RBP25.23■■□□□ 1.63
ARFIP1-206ENST00000509413 CHIC1Q5VXU3 224 aa23.7■■□□□ 1.38
ARFIP1-206ENST00000509413 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
ARFIP1-206ENST00000509413 PHF23Q9BUL5 403 aaPredicted RBP21.32■■□□□ 1
ARFIP1-206ENST00000509413 FOXD1Q16676 465 aa20.22■□□□□ 0.83
ARFIP1-206ENST00000509413 POTEDQ86YR6 584 aa19.46■□□□□ 0.71
ARFIP1-206ENST00000509413 MSH5O43196 834 aa19.18■□□□□ 0.66
ARFIP1-206ENST00000509413 PIAS4Q8N2W9 510 aaPredicted RBP18.85■□□□□ 0.61
ARFIP1-206ENST00000509413 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
ARFIP1-206ENST00000509413 PPP6R1Q9UPN7 881 aa18.51■□□□□ 0.55
ARFIP1-206ENST00000509413 ADRA2BP18089 450 aa18.47■□□□□ 0.55
ARFIP1-206ENST00000509413 DMRT2Q9Y5R5 561 aa17.1■□□□□ 0.33
ARFIP1-206ENST00000509413 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
ARFIP1-206ENST00000509413 SCAF1Q9H7N4 1312 aaKnown RBP17■□□□□ 0.31
ARFIP1-206ENST00000509413 CACNB1Q02641 598 aaPredicted RBP16.78■□□□□ 0.28
ARFIP1-206ENST00000509413 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
ARFIP1-206ENST00000509413 PPP4R3CPQ6ZMV5 832 aa16.38■□□□□ 0.21
ARFIP1-206ENST00000509413 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
ARFIP1-206ENST00000509413 HOXD11P31277 338 aaPredicted RBP16.26■□□□□ 0.19
ARFIP1-206ENST00000509413 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
ARFIP1-206ENST00000509413 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
ARFIP1-206ENST00000509413 C1QBPQ07021 282 aaKnown RBP16.04■□□□□ 0.16
ARFIP1-206ENST00000509413 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
ARFIP1-206ENST00000509413 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
ARFIP1-206ENST00000509413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.6■□□□□ 0.09
ARFIP1-206ENST00000509413 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
ARFIP1-206ENST00000509413 POTEHQ6S545 545 aa15.19■□□□□ 0.02
ARFIP1-206ENST00000509413 KCNA4P22459 653 aa15.18■□□□□ 0.02
ARFIP1-206ENST00000509413 CAPN15O75808 1086 aa15.14■□□□□ 0.01
ARFIP1-206ENST00000509413 U3KPZ7 1027 aaPredicted RBP15.13■□□□□ 0.01
ARFIP1-206ENST00000509413 DSG3P32926 999 aa15.07■□□□□ 0
ARFIP1-206ENST00000509413 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
ARFIP1-206ENST00000509413 SLC4A2P04920 1241 aa14.86□□□□□ -0.03
ARFIP1-206ENST00000509413 APLP2Q06481 763 aa14.79□□□□□ -0.04
ARFIP1-206ENST00000509413 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
ARFIP1-206ENST00000509413 ZNF219Q9P2Y4 722 aaPredicted RBP14.73□□□□□ -0.05
ARFIP1-206ENST00000509413 ABCB7O75027 752 aa14.72□□□□□ -0.05
ARFIP1-206ENST00000509413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
ARFIP1-206ENST00000509413 HNRNPUL2Q1KMD3 747 aaKnown RBP14.63□□□□□ -0.07
ARFIP1-206ENST00000509413 SAMD1Q6SPF0 538 aaPredicted RBP14.5□□□□□ -0.09
ARFIP1-206ENST00000509413 RBM42Q9BTD8 480 aaKnown RBP14.49□□□□□ -0.09
ARFIP1-206ENST00000509413 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
ARFIP1-206ENST00000509413 CHRDL2Q6WN34 429 aa14.31□□□□□ -0.12
ARFIP1-206ENST00000509413 SLC4A1APQ9BWU0 796 aaKnown RBP14.28□□□□□ -0.12
ARFIP1-206ENST00000509413 POLA2Q14181 598 aa14.23□□□□□ -0.13
ARFIP1-206ENST00000509413 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
ARFIP1-206ENST00000509413 ATF5Q9Y2D1 282 aaPredicted RBP14.05□□□□□ -0.16
ARFIP1-206ENST00000509413 SP7Q8TDD2 431 aaPredicted RBP14.03□□□□□ -0.16
ARFIP1-206ENST00000509413 AKT1S1Q96B36 256 aa14.01□□□□□ -0.17
ARFIP1-206ENST00000509413 ZBTB22O15209 634 aa13.98□□□□□ -0.17
ARFIP1-206ENST00000509413 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
ARFIP1-206ENST00000509413 REM2Q8IYK8 340 aaPredicted RBP13.87□□□□□ -0.19
ARFIP1-206ENST00000509413 PIP4P2Q8N4L2 257 aa13.85□□□□□ -0.19
ARFIP1-206ENST00000509413 HAX1O00165 279 aa13.8□□□□□ -0.2
ARFIP1-206ENST00000509413 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
ARFIP1-206ENST00000509413 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
ARFIP1-206ENST00000509413 ATXN8OSP0DMR3 200 aa13.72□□□□□ -0.21
ARFIP1-206ENST00000509413 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
ARFIP1-206ENST00000509413 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
ARFIP1-206ENST00000509413 EVX2Q03828 476 aa13.46□□□□□ -0.25
ARFIP1-206ENST00000509413 SPDYE2BA6NHP3 402 aa13.45□□□□□ -0.26
ARFIP1-206ENST00000509413 SPDYE6P0CI01 402 aa13.45□□□□□ -0.26
ARFIP1-206ENST00000509413 SPDYE2Q495Y8 402 aa13.45□□□□□ -0.26
ARFIP1-206ENST00000509413 FBLN2P98095 1184 aa13.43□□□□□ -0.26
ARFIP1-206ENST00000509413 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
ARFIP1-206ENST00000509413 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
ARFIP1-206ENST00000509413 CLEC11AQ9Y240 323 aa13.38□□□□□ -0.27
ARFIP1-206ENST00000509413 SPDYE1Q8NFV5 336 aaPredicted RBP13.36□□□□□ -0.27
ARFIP1-206ENST00000509413 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
ARFIP1-206ENST00000509413 C19orf67A6NJJ6 358 aa13.25□□□□□ -0.29
ARFIP1-206ENST00000509413 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
ARFIP1-206ENST00000509413 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
ARFIP1-206ENST00000509413 GABBR2O75899 941 aa13.19□□□□□ -0.3
ARFIP1-206ENST00000509413 LHX8Q68G74 356 aa13.16□□□□□ -0.3
ARFIP1-206ENST00000509413 CHADLQ6NUI6 762 aa13.12□□□□□ -0.31
ARFIP1-206ENST00000509413 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
ARFIP1-206ENST00000509413 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
ARFIP1-206ENST00000509413 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
ARFIP1-206ENST00000509413 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
ARFIP1-206ENST00000509413 CLCN6P51797 869 aa12.87□□□□□ -0.35
ARFIP1-206ENST00000509413 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
ARFIP1-206ENST00000509413 DCBLD2Q96PD2 775 aa12.82□□□□□ -0.36
ARFIP1-206ENST00000509413 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
ARFIP1-206ENST00000509413 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
ARFIP1-206ENST00000509413 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
ARFIP1-206ENST00000509413 ZNF579Q8NAF0 562 aaKnown RBP12.69□□□□□ -0.38
ARFIP1-206ENST00000509413 STAG3Q9UJ98 1225 aa12.63□□□□□ -0.39
ARFIP1-206ENST00000509413 CREBZFQ9NS37 354 aa12.62□□□□□ -0.39
ARFIP1-206ENST00000509413 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
ARFIP1-206ENST00000509413 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
ARFIP1-206ENST00000509413 OTUD5Q96G74 571 aa12.5□□□□□ -0.41
ARFIP1-206ENST00000509413 PHF12Q96QT6 1004 aa12.45□□□□□ -0.42
ARFIP1-206ENST00000509413 PROM2Q8N271 834 aa12.43□□□□□ -0.42
ARFIP1-206ENST00000509413 POTEMA6NI47 508 aa12.42□□□□□ -0.42
ARFIP1-206ENST00000509413 POTEB2H3BUK9 544 aa12.42□□□□□ -0.42
ARFIP1-206ENST00000509413 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
ARFIP1-206ENST00000509413 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
ARFIP1-206ENST00000509413 POTEGQ6S5H5 508 aa12.37□□□□□ -0.43
ARFIP1-206ENST00000509413 PELP1Q8IZL8 1130 aaKnown RBP12.33□□□□□ -0.44
ARFIP1-206ENST00000509413 METRNQ9UJH8 293 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms