Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC22■■□□□ 1.11
CLCN1P35523 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22■■□□□ 1.11
CLCN1P35523 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLCN1P35523 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN1P35523 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLCN1P35523 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN1P35523 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22■■□□□ 1.11
CLCN1P35523 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLCN1P35523 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22■■□□□ 1.11
CLCN1P35523 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22■■□□□ 1.11
CLCN1P35523 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22■■□□□ 1.11
CLCN1P35523 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLCN1P35523 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC22■■□□□ 1.11
CLCN1P35523 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN1P35523 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22■■□□□ 1.11
CLCN1P35523 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN1P35523 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN1P35523 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.99■■□□□ 1.11
CLCN1P35523 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN1P35523 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.99■■□□□ 1.11
CLCN1P35523 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.99■■□□□ 1.11
CLCN1P35523 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN1P35523 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.99■■□□□ 1.11
CLCN1P35523 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.99■■□□□ 1.11
CLCN1P35523 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CLCN1P35523 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.99■■□□□ 1.11
CLCN1P35523 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.99■■□□□ 1.11
CLCN1P35523 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CLCN1P35523 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN1P35523 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN1P35523 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN1P35523 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN1P35523 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CLCN1P35523 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CLCN1P35523 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN1P35523 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN1P35523 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.98■■□□□ 1.11
CLCN1P35523 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN1P35523 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN1P35523 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.98■■□□□ 1.11
CLCN1P35523 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.98■■□□□ 1.11
CLCN1P35523 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.98■■□□□ 1.11
CLCN1P35523 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.98■■□□□ 1.11
CLCN1P35523 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
CLCN1P35523 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.98■■□□□ 1.11
CLCN1P35523 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN1P35523 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC21.98■■□□□ 1.11
CLCN1P35523 AC006333.2-201ENST00000607957 2099 ntBASIC21.98■■□□□ 1.11
CLCN1P35523 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN1P35523 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN1P35523 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.98■■□□□ 1.11
CLCN1P35523 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN1P35523 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN1P35523 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CLCN1P35523 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.98■■□□□ 1.11
CLCN1P35523 PCDHA12-202ENST00000613593 2588 ntBASIC21.97■■□□□ 1.11
CLCN1P35523 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CLCN1P35523 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN1P35523 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN1P35523 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN1P35523 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN1P35523 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN1P35523 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CLCN1P35523 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.97■■□□□ 1.11
CLCN1P35523 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN1P35523 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN1P35523 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.97■■□□□ 1.11
CLCN1P35523 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.97■■□□□ 1.11
CLCN1P35523 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN1P35523 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
CLCN1P35523 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN1P35523 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.97■■□□□ 1.11
CLCN1P35523 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.97■■□□□ 1.11
CLCN1P35523 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN1P35523 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.97■■□□□ 1.11
CLCN1P35523 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN1P35523 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.97■■□□□ 1.11
CLCN1P35523 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN1P35523 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CLCN1P35523 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN1P35523 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.97■■□□□ 1.11
CLCN1P35523 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.97■■□□□ 1.11
CLCN1P35523 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN1P35523 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN1P35523 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN1P35523 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN1P35523 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
CLCN1P35523 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CLCN1P35523 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN1P35523 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN1P35523 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN1P35523 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.96■■□□□ 1.11
CLCN1P35523 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.96■■□□□ 1.11
CLCN1P35523 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.96■■□□□ 1.11
CLCN1P35523 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN1P35523 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN1P35523 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN1P35523 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CLCN1P35523 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CLCN1P35523 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms