Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.41■□□□□ 0.54
MMP11P24347 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 RNF165-205ENST00000588679 2904 ntBASIC18.41■□□□□ 0.54
MMP11P24347 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MMP11P24347 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.41■□□□□ 0.54
MMP11P24347 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.41■□□□□ 0.54
MMP11P24347 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.41■□□□□ 0.54
MMP11P24347 C1QL1P1-201ENST00000568105 661 ntBASIC18.41■□□□□ 0.54
MMP11P24347 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
MMP11P24347 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP11P24347 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
MMP11P24347 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
MMP11P24347 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP11P24347 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
MMP11P24347 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP11P24347 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP11P24347 BX119927.1-201ENST00000636596 1552 ntBASIC18.4■□□□□ 0.54
MMP11P24347 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP11P24347 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP11P24347 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP11P24347 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.4■□□□□ 0.54
MMP11P24347 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.4■□□□□ 0.54
MMP11P24347 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.4■□□□□ 0.54
MMP11P24347 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.4■□□□□ 0.54
MMP11P24347 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP11P24347 CR392000.1-201ENST00000624770 1228 ntBASIC18.4■□□□□ 0.54
MMP11P24347 AC133561.5-201ENST00000635547 218 ntBASIC18.4■□□□□ 0.54
MMP11P24347 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.4■□□□□ 0.54
MMP11P24347 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP11P24347 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
MMP11P24347 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP11P24347 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP11P24347 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.4■□□□□ 0.54
MMP11P24347 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP11P24347 KRT16P1-201ENST00000399124 1418 ntBASIC18.4■□□□□ 0.54
MMP11P24347 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP11P24347 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
MMP11P24347 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
MMP11P24347 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
MMP11P24347 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
MMP11P24347 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.39■□□□□ 0.53
MMP11P24347 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP11P24347 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
MMP11P24347 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 KRT18P16-201ENST00000510337 1294 ntBASIC18.39■□□□□ 0.53
MMP11P24347 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.39■□□□□ 0.53
MMP11P24347 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.39■□□□□ 0.53
MMP11P24347 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP11P24347 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.39■□□□□ 0.53
MMP11P24347 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.39■□□□□ 0.53
MMP11P24347 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
MMP11P24347 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
MMP11P24347 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
MMP11P24347 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP11P24347 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP11P24347 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP11P24347 TMEM179-206ENST00000616017 1645 ntBASIC18.38■□□□□ 0.53
MMP11P24347 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MMP11P24347 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP11P24347 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
MMP11P24347 MMP23A-201ENST00000234610 1017 ntBASIC18.38■□□□□ 0.53
MMP11P24347 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP11P24347 UNC93B2-201ENST00000285383 730 ntBASIC18.38■□□□□ 0.53
MMP11P24347 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP11P24347 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP11P24347 TUBB8P6-201ENST00000436895 1288 ntBASIC18.38■□□□□ 0.53
MMP11P24347 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP11P24347 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP11P24347 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP11P24347 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP11P24347 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP11P24347 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.38■□□□□ 0.53
MMP11P24347 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.38■□□□□ 0.53
MMP11P24347 REXO1L10P-201ENST00000615707 1290 ntBASIC18.38■□□□□ 0.53
MMP11P24347 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms