Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FAM228BP0C875 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.67■□□□□ 0.9
FAM228BP0C875 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
FAM228BP0C875 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.67■□□□□ 0.9
FAM228BP0C875 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FAM228BP0C875 AC098934.4-201ENST00000564127 592 ntBASIC20.67■□□□□ 0.9
FAM228BP0C875 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.67■□□□□ 0.9
FAM228BP0C875 MIR4758-201ENST00000577688 71 ntBASIC20.67■□□□□ 0.9
FAM228BP0C875 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FAM228BP0C875 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.67■□□□□ 0.9
FAM228BP0C875 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
FAM228BP0C875 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FAM228BP0C875 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FAM228BP0C875 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.67■□□□□ 0.9
FAM228BP0C875 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM228BP0C875 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.66■□□□□ 0.9
FAM228BP0C875 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FAM228BP0C875 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM228BP0C875 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM228BP0C875 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.66■□□□□ 0.9
FAM228BP0C875 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
FAM228BP0C875 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FAM228BP0C875 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
FAM228BP0C875 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM228BP0C875 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.66■□□□□ 0.9
FAM228BP0C875 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FAM228BP0C875 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.66■□□□□ 0.9
FAM228BP0C875 YBX1P10-201ENST00000444752 975 ntBASIC20.66■□□□□ 0.9
FAM228BP0C875 AC097658.1-201ENST00000475555 843 ntBASIC20.66■□□□□ 0.9
FAM228BP0C875 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.66■□□□□ 0.9
FAM228BP0C875 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.66■□□□□ 0.9
FAM228BP0C875 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.66■□□□□ 0.9
FAM228BP0C875 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.66■□□□□ 0.9
FAM228BP0C875 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM228BP0C875 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.66■□□□□ 0.9
FAM228BP0C875 KRT8P8-201ENST00000434750 1448 ntBASIC20.66■□□□□ 0.9
FAM228BP0C875 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.66■□□□□ 0.9
FAM228BP0C875 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.66■□□□□ 0.9
FAM228BP0C875 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM228BP0C875 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
FAM228BP0C875 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.66■□□□□ 0.9
FAM228BP0C875 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM228BP0C875 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM228BP0C875 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
FAM228BP0C875 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM228BP0C875 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM228BP0C875 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 FP475955.4-201ENST00000623131 1990 ntBASIC20.65■□□□□ 0.9
FAM228BP0C875 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.65■□□□□ 0.9
FAM228BP0C875 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.65■□□□□ 0.9
FAM228BP0C875 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.65■□□□□ 0.9
FAM228BP0C875 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
FAM228BP0C875 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.65■□□□□ 0.9
FAM228BP0C875 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.65■□□□□ 0.9
FAM228BP0C875 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.65■□□□□ 0.9
FAM228BP0C875 PNMA6B-201ENST00000538162 1200 ntBASIC20.65■□□□□ 0.9
FAM228BP0C875 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.65■□□□□ 0.9
FAM228BP0C875 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
FAM228BP0C875 AL121906.2-201ENST00000621597 723 ntBASIC20.65■□□□□ 0.9
FAM228BP0C875 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.65■□□□□ 0.9
FAM228BP0C875 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.65■□□□□ 0.9
FAM228BP0C875 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.65■□□□□ 0.9
FAM228BP0C875 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM228BP0C875 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
FAM228BP0C875 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FAM228BP0C875 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.64■□□□□ 0.9
FAM228BP0C875 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FAM228BP0C875 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FAM228BP0C875 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.64■□□□□ 0.89
FAM228BP0C875 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FAM228BP0C875 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.64■□□□□ 0.89
FAM228BP0C875 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FAM228BP0C875 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FAM228BP0C875 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.64■□□□□ 0.89
FAM228BP0C875 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.64■□□□□ 0.89
FAM228BP0C875 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.64■□□□□ 0.89
FAM228BP0C875 AC083880.1-201ENST00000608266 535 ntBASIC20.64■□□□□ 0.89
FAM228BP0C875 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
FAM228BP0C875 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FAM228BP0C875 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FAM228BP0C875 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.64■□□□□ 0.89
FAM228BP0C875 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FAM228BP0C875 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
FAM228BP0C875 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FAM228BP0C875 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
FAM228BP0C875 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.63■□□□□ 0.89
FAM228BP0C875 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms