Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.85■□□□□ 0.77
TOP3BO95985 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TOP3BO95985 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
TOP3BO95985 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.85■□□□□ 0.77
TOP3BO95985 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TOP3BO95985 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.84■□□□□ 0.77
TOP3BO95985 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.84■□□□□ 0.77
TOP3BO95985 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.84■□□□□ 0.77
TOP3BO95985 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.84■□□□□ 0.77
TOP3BO95985 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.84■□□□□ 0.77
TOP3BO95985 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.84■□□□□ 0.77
TOP3BO95985 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.84■□□□□ 0.77
TOP3BO95985 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TOP3BO95985 AC026471.5-201ENST00000615068 467 ntBASIC19.84■□□□□ 0.77
TOP3BO95985 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TOP3BO95985 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TOP3BO95985 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.84■□□□□ 0.77
TOP3BO95985 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TOP3BO95985 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
TOP3BO95985 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.83■□□□□ 0.77
TOP3BO95985 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP3BO95985 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP3BO95985 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP3BO95985 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP3BO95985 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP3BO95985 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TOP3BO95985 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP3BO95985 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
TOP3BO95985 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP3BO95985 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.83■□□□□ 0.77
TOP3BO95985 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.83■□□□□ 0.77
TOP3BO95985 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.83■□□□□ 0.77
TOP3BO95985 AP003071.4-201ENST00000562276 1284 ntBASIC19.83■□□□□ 0.77
TOP3BO95985 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.83■□□□□ 0.77
TOP3BO95985 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.83■□□□□ 0.77
TOP3BO95985 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.83■□□□□ 0.77
TOP3BO95985 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.83■□□□□ 0.76
TOP3BO95985 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TOP3BO95985 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TOP3BO95985 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.83■□□□□ 0.76
TOP3BO95985 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TOP3BO95985 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TOP3BO95985 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TOP3BO95985 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TOP3BO95985 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TOP3BO95985 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TOP3BO95985 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TOP3BO95985 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TOP3BO95985 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TOP3BO95985 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
TOP3BO95985 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
TOP3BO95985 AC004408.2-201ENST00000623613 2777 ntBASIC19.82■□□□□ 0.76
TOP3BO95985 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TOP3BO95985 KRT18P57-201ENST00000443599 1254 ntBASIC19.82■□□□□ 0.76
TOP3BO95985 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.82■□□□□ 0.76
TOP3BO95985 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.82■□□□□ 0.76
TOP3BO95985 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TOP3BO95985 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
TOP3BO95985 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TOP3BO95985 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP3BO95985 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP3BO95985 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP3BO95985 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP3BO95985 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TOP3BO95985 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TOP3BO95985 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.81■□□□□ 0.76
TOP3BO95985 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.81■□□□□ 0.76
TOP3BO95985 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.81■□□□□ 0.76
TOP3BO95985 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.81■□□□□ 0.76
TOP3BO95985 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.81■□□□□ 0.76
TOP3BO95985 RARRES2P10-201ENST00000564312 460 ntBASIC19.81■□□□□ 0.76
TOP3BO95985 AC005363.2-201ENST00000618631 242 ntBASIC19.81■□□□□ 0.76
TOP3BO95985 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP3BO95985 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP3BO95985 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TOP3BO95985 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.81■□□□□ 0.76
TOP3BO95985 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP3BO95985 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TOP3BO95985 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms