Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA2O43364 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.78■□□□□ 0.92
HOXA2O43364 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
HOXA2O43364 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA2O43364 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA2O43364 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.77■□□□□ 0.92
HOXA2O43364 AC073314.1-201ENST00000568729 2216 ntBASIC20.77■□□□□ 0.92
HOXA2O43364 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HOXA2O43364 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA2O43364 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA2O43364 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXA2O43364 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA2O43364 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXA2O43364 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA2O43364 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXA2O43364 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.77■□□□□ 0.92
HOXA2O43364 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXA2O43364 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.77■□□□□ 0.92
HOXA2O43364 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA2O43364 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA2O43364 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXA2O43364 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXA2O43364 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
HOXA2O43364 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
HOXA2O43364 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HOXA2O43364 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.77■□□□□ 0.91
HOXA2O43364 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HOXA2O43364 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.77■□□□□ 0.91
HOXA2O43364 AL691432.2-201ENST00000607222 2038 ntBASIC20.77■□□□□ 0.91
HOXA2O43364 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXA2O43364 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HOXA2O43364 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HOXA2O43364 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXA2O43364 AP005212.1-201ENST00000581547 1997 ntBASIC20.76■□□□□ 0.91
HOXA2O43364 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
HOXA2O43364 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA2O43364 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA2O43364 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA2O43364 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA2O43364 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.76■□□□□ 0.91
HOXA2O43364 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA2O43364 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.76■□□□□ 0.91
HOXA2O43364 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.76■□□□□ 0.91
HOXA2O43364 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA2O43364 AL121956.5-201ENST00000625261 221 ntBASIC20.76■□□□□ 0.91
HOXA2O43364 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA2O43364 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA2O43364 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HOXA2O43364 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA2O43364 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA2O43364 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA2O43364 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA2O43364 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA2O43364 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA2O43364 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HOXA2O43364 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA2O43364 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA2O43364 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
HOXA2O43364 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA2O43364 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA2O43364 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.75■□□□□ 0.91
HOXA2O43364 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXA2O43364 AP000550.4-202ENST00000639755 178 ntBASIC20.75■□□□□ 0.91
HOXA2O43364 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA2O43364 KRT8P11-201ENST00000409686 1436 ntBASIC20.75■□□□□ 0.91
HOXA2O43364 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HOXA2O43364 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA2O43364 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXA2O43364 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA2O43364 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXA2O43364 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
HOXA2O43364 AL512408.1-201ENST00000569378 2000 ntBASIC20.75■□□□□ 0.91
HOXA2O43364 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA2O43364 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXA2O43364 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXA2O43364 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXA2O43364 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.74■□□□□ 0.91
HOXA2O43364 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXA2O43364 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA2O43364 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA2O43364 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXA2O43364 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA2O43364 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXA2O43364 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA2O43364 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXA2O43364 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA2O43364 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA2O43364 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXA2O43364 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXA2O43364 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA2O43364 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA2O43364 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXA2O43364 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA2O43364 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA2O43364 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA2O43364 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXA2O43364 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.74■□□□□ 0.91
HOXA2O43364 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.74■□□□□ 0.91
HOXA2O43364 AC008622.2-201ENST00000617006 1229 ntBASIC20.74■□□□□ 0.91
HOXA2O43364 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms