Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 TREX1-205ENST00000625293 1783 ntBASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 AC009113.1-201ENST00000570267 2443 ntBASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV25-1A0A075B6N4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV25-1A0A075B6N4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.96□□□□□ -0.18
TRBV25-1A0A075B6N4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV25-1A0A075B6N4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TRBV25-1A0A075B6N4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV25-1A0A075B6N4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV25-1A0A075B6N4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV25-1A0A075B6N4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV25-1A0A075B6N4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV25-1A0A075B6N4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.96□□□□□ -0.18
TRBV25-1A0A075B6N4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
TRBV25-1A0A075B6N4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 CYP21A1P-202ENST00000354927 1481 ntBASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 AC007322.4-201ENST00000509611 723 ntBASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 DBI-210ENST00000542275 757 ntTSL 5 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 AC106820.2-201ENST00000563775 3264 ntBASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV25-1A0A075B6N4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV25-1A0A075B6N4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV25-1A0A075B6N4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms