Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 UNC93B4-201ENST00000505679 747 ntBASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 KRT18P6-201ENST00000555540 1265 ntBASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 AC124283.5-201ENST00000624661 1809 ntBASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 TFP1-202ENST00000475455 1573 ntBASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DRB4X5D2U9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DRB4X5D2U9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-DRB4X5D2U9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-DRB4X5D2U9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-DRB4X5D2U9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.58□□□□□ -0.07
HLA-DRB4X5D2U9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-DRB4X5D2U9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.58□□□□□ -0.07
HLA-DRB4X5D2U9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms