Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 PHGDH-210ENST00000641115 1638 ntBASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 AC007322.1-201ENST00000426983 750 ntBASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 BID-214ENST00000617586 542 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 AC007613.1-201ENST00000572811 2597 ntBASIC16.84■□□□□ 0.29
PCDHB16Q9NRJ7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.83■□□□□ 0.29
PCDHB16Q9NRJ7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHB16Q9NRJ7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 CNN2P6-201ENST00000439038 900 ntBASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 C2orf69P4-201ENST00000565394 541 ntBASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB16Q9NRJ7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 AL512625.2-201ENST00000417533 625 ntBASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
PCDHB16Q9NRJ7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 OR6D1P-202ENST00000641007 5290 ntBASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 AC093484.2-201ENST00000580996 2166 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms