Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AP004607.4-201ENST00000530158 1459 ntBASIC17.62■□□□□ 0.41
HMG20AQ9NP66 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMG20AQ9NP66 BX119927.1-201ENST00000636596 1552 ntBASIC17.62■□□□□ 0.41
HMG20AQ9NP66 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 AC061975.6-201ENST00000579045 1553 ntBASIC17.61■□□□□ 0.41
HMG20AQ9NP66 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20AQ9NP66 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 AC008175.2-201ENST00000612840 297 ntBASIC17.6■□□□□ 0.41
HMG20AQ9NP66 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 AC106820.2-201ENST00000563775 3264 ntBASIC17.6■□□□□ 0.41
HMG20AQ9NP66 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HMG20AQ9NP66 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 LINC02228-203ENST00000641970 1355 ntBASIC17.59■□□□□ 0.41
HMG20AQ9NP66 POU5F1P4-201ENST00000413175 1085 ntBASIC17.59■□□□□ 0.41
HMG20AQ9NP66 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HMG20AQ9NP66 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMG20AQ9NP66 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HMG20AQ9NP66 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMG20AQ9NP66 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HMG20AQ9NP66 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.58■□□□□ 0.41
HMG20AQ9NP66 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.58■□□□□ 0.41
HMG20AQ9NP66 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.58■□□□□ 0.41
HMG20AQ9NP66 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.58■□□□□ 0.41
HMG20AQ9NP66 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.58■□□□□ 0.41
HMG20AQ9NP66 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.58■□□□□ 0.41
HMG20AQ9NP66 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMG20AQ9NP66 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms