Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 AL161938.1-201ENST00000569833 2180 ntBASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CYSTM1Q9H1C7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 PP12613-201ENST00000424958 2230 ntBASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 FP475955.4-201ENST00000623131 1990 ntBASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.32□□□□□ -0.6
CYSTM1Q9H1C7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 CICP4-201ENST00000447359 2812 ntBASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms