Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2J3Q9H1A7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 BX276092.2-201ENST00000417668 665 ntBASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 AC026185.1-201ENST00000445748 174 ntBASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2J3Q9H1A7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 CDCA4P2-201ENST00000441182 718 ntBASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 RAP2CP1-201ENST00000605103 478 ntBASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 AL050303.2-201ENST00000619798 666 ntBASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 AC092437.1-201ENST00000624794 1048 ntBASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2J3Q9H1A7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms