Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-2Q9C056 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
NKX6-2Q9C056 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.72■□□□□ 0.11
NKX6-2Q9C056 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-2Q9C056 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-2Q9C056 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-2Q9C056 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-2Q9C056 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.72■□□□□ 0.11
NKX6-2Q9C056 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-2Q9C056 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.71■□□□□ 0.1
NKX6-2Q9C056 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NKX6-2Q9C056 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
NKX6-2Q9C056 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NKX6-2Q9C056 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NKX6-2Q9C056 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 SMUG1P1-201ENST00000590640 811 ntBASIC15.7■□□□□ 0.1
NKX6-2Q9C056 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
NKX6-2Q9C056 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 SYT6-210ENST00000641643 1587 ntBASIC15.69■□□□□ 0.1
NKX6-2Q9C056 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 AC018695.7-201ENST00000624587 2492 ntBASIC15.69■□□□□ 0.1
NKX6-2Q9C056 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
NKX6-2Q9C056 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms