Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 AC091390.4-202ENST00000476426 537 ntBASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 Z85996.1-201ENST00000494644 937 ntBASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 AC097488.1-201ENST00000507834 756 ntBASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 KRT18P35-201ENST00000510488 1269 ntBASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 FITM1-202ENST00000559294 800 ntBASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 AL031985.4-201ENST00000642138 673 ntBASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
KRTAP4-3Q9BYR4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 AC104076.2-201ENST00000448912 469 ntBASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 NAPSB-206ENST00000562112 1266 ntBASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 TK2-213ENST00000563369 882 ntTSL 5 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 AC145285.6-201ENST00000604632 637 ntBASIC6.6□□□□□ -1.35
KRTAP4-3Q9BYR4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms