Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
NPIPB3Q92617 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.32■□□□□ 0.04
NPIPB3Q92617 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
NPIPB3Q92617 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.32■□□□□ 0.04
NPIPB3Q92617 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.32■□□□□ 0.04
NPIPB3Q92617 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 GPX1P1-201ENST00000388829 606 ntBASIC15.31■□□□□ 0.04
NPIPB3Q92617 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 AC004911.1-201ENST00000416316 871 ntBASIC15.31■□□□□ 0.04
NPIPB3Q92617 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPB3Q92617 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB3Q92617 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB3Q92617 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB3Q92617 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB3Q92617 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB3Q92617 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NPIPB3Q92617 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB3Q92617 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NPIPB3Q92617 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB3Q92617 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB3Q92617 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB3Q92617 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.3■□□□□ 0.04
NPIPB3Q92617 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB3Q92617 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB3Q92617 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.3■□□□□ 0.04
NPIPB3Q92617 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NPIPB3Q92617 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB3Q92617 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NPIPB3Q92617 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.3■□□□□ 0.04
NPIPB3Q92617 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB3Q92617 AC022517.1-201ENST00000592429 346 ntBASIC15.3■□□□□ 0.04
NPIPB3Q92617 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NPIPB3Q92617 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB3Q92617 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 AC133552.2-202ENST00000575694 574 ntBASIC15.29■□□□□ 0.04
NPIPB3Q92617 MIR5787-201ENST00000611784 55 ntBASIC15.29■□□□□ 0.04
NPIPB3Q92617 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms